Populus trichocarpa (black cottonwood): 7476932
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Entry
7476932 CDS
T01077
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1
KO
K12192
charged multivesicular body protein 2B
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7476932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7476932
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7476932
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
7476932
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7476932
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
YlqD
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
7476932
NCBI-ProteinID:
XP_052308845
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All DBs
Position
5:complement(22753736..22757207)
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AA seq
219 aa
AA seq
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MNLFSKKPSPKAISLGCAEALRDSKREMQHATRGIEREIGALQLEEKKLVAEIKRTAKTG
NDAATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAQSSVAVGLKGASKAMEAMN
KQMAPAKQMKVIREFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVD
VASQLSVAPKGKITGKNREDASSSGIDELEKRLAAMRNP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcttcagcaaaaaaccaagccctaaagcgatctctttgggttgtgcagaggct
cttcgagatagtaagagagaaatgcaacatgctactagaggtatagagagggaaatcgga
gcattgcagctagaagaaaagaagcttgttgcggagataaaacggacagctaagactgga
aacgatgcagcaactaaaattttagcccggcagctaatcaggctcaggcagcaaatagct
aacttacaaggcagtcgagctcaaatgagaggcatagcgacccatactcaggcaatgcat
gctcagtcttcagttgctgttggtttaaaaggtgccagtaaggcaatggaagctatgaat
aagcaaatggcgcctgcaaagcaaatgaaggttataagagagtttcagaagcagtcagca
caaatggatatgactactgaaatgatgtcggatgccatagacgatgccttggataacgat
gaggctgaagaggagactgaagagctgacgaatcaggtgctggatgaaattggtgttgat
gttgcctcacagttgtcagtggcaccaaagggtaaaatcacagggaagaatagagaggat
gccagcagttctggcattgacgagctagagaaacgtttggcagccatgagaaacccttga
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