Populus trichocarpa (black cottonwood): 7479248
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Entry
7479248 CDS
T01077
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00280
Valine, leucine and isoleucine degradation
pop00650
Butanoate metabolism
pop00900
Terpenoid backbone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
7479248
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
7479248
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
7479248
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
7479248
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
7479248
NCBI-ProteinID:
XP_002304458
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All DBs
Position
3:complement(14136548..14157241)
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AA seq
464 aa
AA seq
DB search
MAKNVGILAVDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCMGFCTEVEDVISMSLTV
VSSLLEKYNVDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNACYGG
TAALFNCVNWVESCSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPDAPITFESK
FRGSHMSHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKQFCAKYEKSTGKQFSISD
AAYFVFHSPYNKLVQKSFARLVFDDSVRNASSIDEAAKEKLAPFSTLSGDESYQNRDLEK
VSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAAFISLLHNKSSELAGKRVILFSYGSG
STATMFSLKLHEGQKPFSLSNIATVMNVSTKLKSRHEFSAVKFVETINLMEHRYGGKDFV
TSKDCSLLAPGTYYLTEVDSMYRRFYAKKPVDGACENGSLVNGH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatgtgggaatcctcgctgtggatatttacttccctcctacctgtgttcaa
caggaagccctggaggcccacgatggtgcaagcaaagggaaatacacaattggacttgga
caagattgcatgggattttgtacagaagtggaagatgttatctcaatgagtttgacagtt
gtgagttcacttcttgagaagtacaatgttgatccaaaacaaattggtcgcttagaagtt
ggcagtgagaccgttattgacaagagcaaatccattaagaccttcttgatgcaaatcttc
gagaaatgtggaaacactgacattgaaggcgttgactcaactaatgcatgctatggagga
actgcagctttattcaactgtgtcaattgggttgagagttgctcatgggatggacgatat
gggcttgttgtgtgtactgacagtgcggtctatgcagaagggcctgctcgaccaactgga
ggagctgctgccattgccatgctagtcggtccggatgcacctattacttttgaaagcaaa
tttagggggagtcacatgtctcatgtctatgatttctataagcccaaccttgccagtgaa
tatccggttgtggatggcaagctttcccaaacatgctacctcatggcccttgattcctgc
tacaaacaattttgtgccaagtacgagaaatcaacaggcaaacaattctctatttctgat
gctgcctattttgtattccattctccatataacaagcttgtacagaaaagttttgctcgt
ttggtgttcgatgactctgtgagaaatgccagctctattgatgaggctgctaaagagaaa
ctagcaccattttcaactttatctggtgatgaaagctaccaaaaccgggatcttgagaag
gtatcccagcaagttgcaaagcctctttatgacgcaaaggtgcaaccaaccactttgata
cccaagcaagttggcaacatgtatactgcatctctctatgcggcatttatatcccttctt
cacaataaaagtagtgaattggcgggcaagagggttatattgttctcatatggaagtggt
tcgacagccacaatgttctcattgaaattacatgaaggtcaaaagccatttagcttgtca
aacattgcaaccgtgatgaatgtctcaacgaagttgaagtcaaggcatgagttttctgca
gtgaaatttgtcgaaactataaatctaatggagcacaggtacggaggcaaggactttgtg
acgagcaaggattgtagcctcttggctccaggaacgtactatctgacggaagtcgactct
atgtaccgaagattttatgccaagaagcctgtggatggtgcttgcgagaatggttcactt
gtcaatggtcactaa
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