Populus trichocarpa (black cottonwood): 7479640
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Entry
7479640 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7479640
KO
K12865
polyglutamine-binding protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7479640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7479640
Spliceosome [BR:
pop03041
]
Complex B
Other components
Prp19 complex
7479640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
WW_USP8
Motif
Other DBs
NCBI-GeneID:
7479640
NCBI-ProteinID:
XP_002308857
UniProt:
B9HDT8
LinkDB
All DBs
Position
6:complement(2009722..2015710)
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AA seq
457 aa
AA seq
DB search
MGENTVPQASYHSSSSLYSNSTDIDTAAQDVLLREQEIETQRVIQGQRDAESEGGAPSKD
NTDVFGERRDPNALKEHLLKMATEHRSEMALKRGKPAGAEEDHVEIGNGYGVPGGGAYYA
SSRPGLDSESEQKSATKDLPEFLKQKLRARGLLKDDTVKSHPLRTDNKSETGSTQAVEIR
KLPPGWVEAKDPASGASYYYHGSTGKTQWERPTDMPSTTWTPSPLPHLEDWVEALDETTG
HKYYYNTKTHVSQWQHPKSSQLASQHSHISYSGNASSGNQDNRSSESKKCIECGGWGLGV
VQTWGYCNHCTRVLNLPQCQYMMPNLNYQQQNLANSKGDLEKNAPKQRPNWKPPVGKGNR
RESKKRAYNDDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQRPYPSPG
AVLRKNAEVATQTKKSSSPYMPISKRGDGSDGLGDAD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaatacagtgcctcaagcttcttaccattcatcatcaagtctatatagcaat
tcaactgacattgataccgcagctcaagatgtactcttgcgtgaacaagaaattgagaca
caaagagtcattcaaggccaaagagatgcagaaagtgaaggtggagcaccttctaaggat
aatactgatgttttcggtgaaaggagagaccctaatgccttaaaggaacatttactgaag
atggctactgaacatcgctcggaaatggctttgaagcgtgggaagcctgctggtgctgaa
gaagatcatgtagaaattgggaacggatacggtgtaccaggtggaggtgcatattatgct
tcttcaaggcctggcctcgatagtgagtcagaacagaagtcggctacaaaggatctccca
gagttcctgaagcagaaattaagagcaaggggtctcctgaaggatgatacagtaaaaagc
catccattgagaactgataataagtcagagactggttcaacacaagctgttgaaatccgg
aagttgcctcctggatgggtggaagcaaaggatcctgctagtggtgcttcatattattac
catggaagcaccggaaagacccagtgggaaaggccaactgatatgccttcaaccacatgg
actccatcacctttacctcatttagaagattgggtggaggcattggacgaaactacaggt
cataaatattactacaatacgaagacccatgtatcacaatggcagcatccaaaatcatca
cagctagcctcacaacactctcacatctcatattctggaaatgcttctagtgggaatcag
gacaatagatcatccgagtcaaagaaatgcatcgaatgtggtgggtggggactcggtgtt
gtgcagacttggggttactgcaatcattgcacacgagttctgaatctaccacaatgccag
tacatgatgcccaatttgaattaccagcagcagaatcttgcaaattcgaagggtgatctt
gaaaaaaatgctccaaaacagaggcccaattggaaacctcctgtgggaaaaggaaataga
agagagagcaaaaagcgtgcctacaatgatgatgatgagttggaccccatggatccaagc
tcttattcagatgctccccgtggcggctgggttgtgggcctcaaaggagttcagcctcgt
gcagctgatactactgctacgggtccgctatttcaacagcgaccatacccatcaccagga
gctgtcttgcgaaagaatgctgaggtcgcaacacaaaccaagaaatccagctctccttac
atgcctatatccaagagaggagatggtagtgatggtcttggagatgccgactga
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