Populus trichocarpa (black cottonwood): 7485449
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Entry
7485449 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7485449
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pop00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
7485449
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
7485449
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7485449
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
7485449
Glycosyltransferases [BR:
pop01003
]
Glycan extension
P blood group
7485449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
7485449
NCBI-ProteinID:
XP_002316629
LinkDB
All DBs
Position
11:complement(3788057..3789828)
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AA seq
448 aa
AA seq
DB search
MNTMHYHITKFKPNCLVYMQHLQNIKRSIFAFLLCIPTSLLALILFLLLFYNGFTVFYFH
LPFPSNPLPEPANFSQGNLAKNSFKKLPASVMYAVKEDTPPVILKTLLPLLQNPAITMIP
INHSVVFKPNKTHGYEAVKRMLRSADNLKRFSTRVREFFGNHGCKVRFFMTWISSLKSFG
DREFFSVESLFRSHPDACLVIVSNSMDSESGSLVLKPFLDKRFKLIAIKPDFDYLFKDTH
AEKWFKGLKKGNVSPGEVSLGQNMSNLLRLALLYKFGGIYMDTDVIVLKRFTKLRNVIGA
QTIDLETRNWSRLNNAVLIFDKKHPLLFKFIEEFALTFDGNKWGHNGPYLVSRVVSRVNG
RPGFNFTVLPPPAFYPVDWSRIRSFFRGPRDKVHSTWLHEKLEQIKSESFAVHLWNKQSR
EIKVESGSIINYIMLDCCVFCNSSSSSL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaacactatgcattaccacatcaccaaatttaaaccgaattgtctggtctatatgcag
cacttgcaaaacataaaaagatcgatctttgcctttctcctgtgcataccaacttcactt
cttgctcttatactctttctcttacttttttataatggtttcactgttttctactttcac
cttccctttccctccaatcctctgccagaacccgccaatttctcacagggaaatcttgct
aaaaattcttttaaaaagctcccagcttcagtgatgtatgcagtgaaagaagatacccca
cccgtgattttaaagacccttttgccacttttgcaaaatccagccattacaatgatacca
attaaccattctgtggtttttaagccaaataagactcacggatacgaagctgtgaagagg
atgctgaggtctgccgacaatttaaagcggttctcaacaagagtaagagaattctttggg
aatcatggatgtaaggttaggttctttatgacttggatttcttctttgaagtcgtttggt
gatagagagtttttttctgttgagagtttgttcaggtctcatccagatgcttgtttggtt
attgtttctaattccatggattctgaaagtgggagtcttgttttaaagccatttttggat
aaacggtttaaattgattgctattaagcctgattttgattatttattcaaggacactcat
gctgagaaatggtttaaagggttaaagaaagggaatgttagccctggagaagtttctttg
ggtcaaaacatgtctaatttgcttaggcttgctttgttgtataagtttggtggtatttat
atggacactgatgtgatagtgttgaagagatttaccaaattgagaaatgttataggggca
caaactattgatcttgaaactaggaattggagcagattgaataatgctgtgttgattttt
gataagaagcatccattactcttcaaattcatcgaagaatttgcactcacatttgatgga
aacaagtggggtcacaatggtccttatctggtttcaagagttgtttcgagagtcaatgga
aggcctgggtttaacttcaccgtactgcctcctcctgcattttatccggtggattggagt
cgaattagaagtttctttagagggcctagagataaggttcactctacatggttgcatgaa
aaacttgagcagattaaaagtgaaagttttgcagttcacttatggaacaagcagagcagg
gagattaaagtggaaagtggaagcataatcaattatataatgttggattgttgtgtcttc
tgcaattcttccagctcgagtttgtaa
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