Populus trichocarpa (black cottonwood): 7487351
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Entry
7487351 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC7487351
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pop00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
7487351
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
7487351
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7487351
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
7487351
Glycosyltransferases [BR:
pop01003
]
Glycan extension
P blood group
7487351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
SseK_NleB
Motif
Other DBs
NCBI-GeneID:
7487351
NCBI-ProteinID:
XP_024459298
LinkDB
All DBs
Position
6:complement(7574931..7576711)
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AA seq
340 aa
AA seq
DB search
MQKVIKEVDHSEHHSSVIPPFNLTEEERIAWFRKKAPGFEILKSKNLTKEFHGRFLEFFS
NECIVQISMTWISPVASFERRELESVFKVHPHGCLLILSRDMDSIQGCRILKPLLDHKYR
VAAIXPDLSFMFKKTPAETWFEEMKSGNKDPGEIPLSQNLSNLIILAVLNKYGGIYLDTD
FIVLKSFAGLRNAIGAQSIGVSKNWTRLNNAVLVFDMNHPLLFKFIEEFASTFDGNKWGH
NGPYLVSRVVQKVAERPGYNFTILPPMAFYPVGWNRIGGFFKKSESNAESRWVNAKLLQL
ISGETYGIHVWNRQSSRFSIEEGSIMGRLISDNCVIWEYK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagtgattaaggaagttgatcatagtgaacatcacagttctgtaattccgccc
ttcaatctcacagaagaagaaagaattgcgtggtttcggaaaaaggcaccggggtttgag
attttgaagtcaaaaaacttgaccaaggaatttcatggtcgatttcttgaatttttcagc
aatgagtgtattgttcaaatctccatgacatggatttcgccggtagcatcctttgaaaga
agagagttggaaagtgtgttcaaagtccaccctcatggctgcttgttgattctatcaaga
gatatggattccatacaaggttgcaggattctgaaaccactacttgaccataagtacaga
gttgctgcaattnnacctgacttgtcctttatgttcaagaaaactccagcagaaacttgg
tttgaagagatgaagagtgggaacaaagaccctggcgaaattccattgtctcagaatcta
tcaaacctcattatacttgcagttttaaacaagtatggagggatttacctggatacagat
ttcattgtcctaaaaagttttgcaggcttgaggaacgcaattggagcacaaagtattggt
gtgtccaagaattggacaagattgaacaatgcagttctagtctttgatatgaatcatcca
ctacttttcaagttcatagaagaattcgcttcgactttcgatggaaataaatgggggcat
aatggaccctatttggtctccagagttgtgcagaaagtggctgagagacctggatataac
tttacaatcttgcctcccatggcattctatccagttggttggaataggataggtggtttt
ttcaagaaatcagaaagcaatgcggaatcaagatgggtaaatgccaagctacttcagctt
ataagtggggagacttatgggatacacgtatggaacaggcagagcagtagattcagcatt
gaagagggaagtatcatgggtagattgatctcagataattgtgtcatttgggaatacaaa
taa
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