Populus trichocarpa (black cottonwood): 7488116
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Entry
7488116 CDS
T01077
Name
(RefSeq) triosephosphate isomerase, cytosolic
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00010
Glycolysis / Gluconeogenesis
pop00051
Fructose and mannose metabolism
pop00562
Inositol phosphate metabolism
pop00710
Carbon fixation by Calvin cycle
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01230
Biosynthesis of amino acids
Module
pop_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
pop_M00002
Glycolysis, core module involving three-carbon compounds
pop_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
pop_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pop_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
7488116
00051 Fructose and mannose metabolism
7488116
00562 Inositol phosphate metabolism
7488116
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
7488116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7488116
Enzymes [BR:
pop01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
7488116
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
7488116
Exosomal proteins of bladder cancer cells
7488116
Exosomal proteins of melanoma cells
7488116
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Gene cluster
GFIT
Motif
Pfam:
TIM
Motif
Other DBs
NCBI-GeneID:
7488116
NCBI-ProteinID:
XP_024464061
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All DBs
Position
9:4209772..4214819
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AA seq
254 aa
AA seq
DB search
MVRKFFVGGNWKCNGTAEEVKKIVTVLSEAEVPSEDDVEVVVSPPFVFLPVVKGLLRPDF
QVAAQNCWVRRGGAFTGEISVEMLVNLGIPWVILGHSERRSLLNESNEFVGDKVAYALSL
GLKVIACVGETLQQRESGSTMAVVAAQTKAIAANVSYWDNVVMAYEPVWAIGTGKVATPA
QAQEVHLELRKWFHDNVGAEVAASTRIIYGGSVNGANCKELAGQPDVDGFLVGGASLKPE
FIDIIKSATVKSQL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggtcagaaaattcttcgtcggcggcaactggaaatgtaatgggaccgctgaggaggtg
aagaagattgtcaccgtgttaagtgaagctgaggttccatctgaggatgatgtcgaggtt
gttgtgagccctccatttgtgtttcttcctgtggtaaaaggtttactgcgacctgatttc
caagtagccgcccaaaattgctgggttcgcagaggtggtgcttttactggagagattagc
gttgagatgctcgtgaatttgggcattccctgggtgattctgggccattctgaacgaaga
tctctgttaaatgagtcaaatgagtttgttggagacaaagttgcttatgcactttcttta
ggcttgaaagtgattgcatgtgtcggtgagacacttcagcagagagagtcaggatctaca
atggctgttgtggctgcacaaacaaaagcaattgcagctaatgtttcatattgggacaat
gttgttatggcctatgagccagtttgggccatcggtacaggaaaggttgcaacacctgct
caggctcaagaagtccatcttgaattgaggaaatggttccatgacaatgttggtgctgaa
gttgctgcgtcaactagaattatctatggaggttctgtaaatggagcaaactgcaaagag
ttggcaggacaaccagatgttgatggatttctagttggtggagcttctctcaagccggag
ttcattgatatcatcaaatctgcaacagtgaagagtcaactgtga
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