Populus trichocarpa (black cottonwood): 7488957
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Entry
7488957 CDS
T01077
Name
(RefSeq) homogentisate phytyltransferase 1, chloroplastic
KO
K09833
homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:
2.5.1.115
2.5.1.116
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01240
Biosynthesis of cofactors
Module
pop_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
7488957
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pop01006
]
7488957
Enzymes [BR:
pop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.115 homogentisate phytyltransferase
7488957
2.5.1.116 homogentisate geranylgeranyltransferase
7488957
Prenyltransferases [BR:
pop01006
]
Compound prenylation
HGA prenyltransferase
7488957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
7488957
NCBI-ProteinID:
XP_006372080
UniProt:
U5FKH2
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Position
18:complement(11115952..11123161)
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AA seq
404 aa
AA seq
DB search
MESLLPGSFPQLSSPLPSGGNYLGETKVKVGHSPREVQVYRCRARKILERQCVVRFQRHH
SGFSVKKSTIYQENNAKFLVHAASGQPFESESGAYNPESTSKSVKNALDAFYRFSRPHTV
IGTALSILSVSLLAIEKLSDISPLFFTGVLEAVAAALMMNIYIVGLNQLTDIEIDKVNKP
YLPLASGEYSISTGVMIVTSFSIMSFWLGWVVGSWPLFWALFISFVLGTAYSINLPLLRW
KRFAFVAAVCILAVRAVIVQLAFYLHMQTHVYGRPPVLSRPLIFATAFMSFFSVVIALFK
DIPDIEGDKIFGIRSFTVRLGQNRVFWTCISLLEIAYAVAILVGAASSYTWSKYITILGH
GILASILWNRAKSVDLKSKASITSCYMFIWKLFYAEYLLIPLVR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagtctttgcttcctgggtcctttcctcagctttcctctccacttccttctggtggg
aattacttgggcgagaccaaagtcaaagtgggtcattctccaagagaagttcaagtttac
aggtgcagagcaaggaagatcctagaaagacagtgtgttgttaggtttcagcggcatcat
agtggattttctgtgaaaaaatctacaatttaccaggaaaataatgctaagttcttagtg
catgctgcctctggacaaccttttgaatctgagtctggagcttataatcctgagagtact
tcaaaatctgtcaaaaatgcattagatgctttctacagattttcacggcctcacactgtt
ataggcacagctttgagcatcttatcagtttctctccttgcaattgagaagctctcggat
atttctccactatttttcacaggggtgttggaggctgtggctgctgctctcatgatgaat
atttatattgtgggtttaaatcagttgactgacattgaaatagacaaggttaacaagcca
tatcttccattggcgtcgggggagtattccataagtactggtgtgatgattgttacatct
ttctctatcatgagtttttggcttggatgggtcgtaggttcgtggccattattttgggct
cttttcatcagttttgttcttggaacagcatattcaatcaatctgccactgttgagatgg
aaaaggtttgcgttcgttgcagcagtgtgcatcctagctgttagggcagtgattgttcaa
cttgccttttatctgcatatgcagacccatgtgtatggaagaccacctgtcctttcaaga
cctctaatttttgcaactgcatttatgagcttcttctcagttgttatagcactattcaag
gacatacctgatattgaaggagataagatttttggcattcggtcttttacagtgcgtttg
ggacaaaaccgggtattttggacctgcatttcattacttgaaattgcttatgctgttgcc
attttggttggagcagcatcttcctatacttggagcaaatatatcacgatattgggtcat
ggcatcctggcttcaatattgtggaaccgtgccaaatctgttgatctgaagagcaaagct
tcaataacttcctgctacatgtttatttggaagctgttttatgccgaatacttgctcata
ccacttgtaagatga
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