Populus trichocarpa (black cottonwood): 7489590
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Entry
7489590 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7489590
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00020
Citrate cycle (TCA cycle)
pop00785
Lipoic acid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
7489590
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
7489590
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
7489590
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
7489590
NCBI-ProteinID:
XP_002315242
UniProt:
B9HTM3
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All DBs
Position
10:19851155..19856320
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AA seq
1021 aa
AA seq
DB search
MAWFRAGSGVARLAIRRTLSQGGSYATRSRVIPPQNRYFHSTVFKSKAQAAPVPRPVPLS
KLTDNFLDGTSSVYLEELQRAWETDPNSVDESWDNFFKNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPALYGFTDADLDREFFLGVWRMAGFLS
ENRPVQTLRAILTRLEQAYCGSIGYEYMHIADREKCNWLRDKIETPTSMQYNRQRREVIL
DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRGRL
NVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
ANPSHLEAVDPVVVGKTRAKQYYSNDSDRTKNMGILIHGDGSFAGQGVVYETLHLSALPN
YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDMEAVVHVCELAA
EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRNHPSALEIYKKKLLESGQVT
EEDISRIQEKVLSILNEEFLASKDYVPKRRDWLSSHWTGFKSPEQLSRVRNTGVKPEILK
NVGKAITTFPENFKPHRAVKKVYEQRLQMIETGEGIDWAVGEALAFATLLVEGNHVRLSG
QDVERGTFSHRHSVVHDQETGEKYCPLDHVVMNQDEEMFTVSNSSLSEFGVLGFELGYSM
ESPNSLVIWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVLLLPHGYDGQGPEHSSAR
LERFLQMSDDNPYVIPEMEPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHRDFRKPLVV
IAPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDRNDHSDLEEGIRRLVLCSG
KIYYELDEVRGKVEAKDTAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYN
YIAPRLSTAMKALERGTVDDIKYVGRGPSAASATGFYQVHVKEQTELVQMAMQPEPIKFP
N
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcatggtttagagcgggttctggtgtagcaaggcttgctatcaggaggactttatct
cagggtggatcatatgcaacgagatcacgggttataccccctcagaatagatactttcat
tcaacagtctttaagtcaaaggcgcaagctgcccctgtcccccgtcctgtgcccctctct
aagctaactgataacttcttagatgggaccagtagtgtttatttagaggagcttcagcga
gcctgggaaactgatccaaacagcgtggatgaatcgtgggacaatttctttaagaacttt
gtgggtcaggctgctacttctcctggaatttcaggccaaactattcaggagagtatgcgt
ttgttgttgcttgtcagggcttaccaggttaatggtcacatgaaagccaagctggatcca
ttggggctggaagaaagagaaatcccagatgatttagaccctgctctatatggtttcaca
gatgctgatcttgatagagaattctttttgggagtgtggaggatggctggatttttgtcc
gaaaaccgtccagtgcagactcttagagccatattgaccaggcttgagcaggcttattgt
gggagcattgggtatgagtacatgcacattgcagatcgtgaaaaatgcaactggttgaga
gacaagattgaaaccccaacatctatgcagtacaaccgtcagcggcgtgaagttattctt
gataggttaatatggagtacgcagtttgaaaacttcttggccactaagtggacgacagct
aagaggtttggactcgaaggtggggagactttgattcctggaatgaaggagatgtttgat
aggtcagctgatcttggggtggagagcatagttattggaatgcctcacagaggaagattg
aatgtactgggtaatgtggttcggaaaccactccgtcaaatatttagcgagtttagtggt
ggcacaaaacctgtagatgaagttgggctctacactggaactggtgatgtcaagtatcac
ttgggaacttcttatgaccgtccaacaagaggtggaaagagaatccatctatctttggtt
gcaaatcctagtcatctagaagctgtggatcctgttgttgttggaaaaactagagccaag
caatattactccaatgattctgacaggactaagaacatgggaatattgattcacggcgat
ggtagcttcgctggacaaggtgtagtgtatgaaactctacatcttagtgcactgccaaac
tatacaactggtgggaccatacatattgtggtgaacaaccaagtcgctttcacaactgat
cctagggcaggaagatcttcacagtattgcactgatgttgccaaggcattgaatgcacct
attttccatgtaaatggagatgatatggaggcagttgttcatgtgtgcgaacttgcagct
gagtggcgccagactttccattcagatgttgtggttgatttagtgtgctatcgtcgtttt
gggcacaatgagatcgatgaaccatcttttacccaacccaaaatgtatcaggttattcgg
aatcatccatcagcactggagatctataaaaagaaactcttagaatctgggcaggtgacc
gaagaagatattagcaggatacaggagaaggtcctttcaatcctcaatgaagaattcttg
gcaagcaaagattatgttcctaaaagaagagattggctttcatctcattggaccgggttt
aagtcacctgaacagctttcacgtgtcagaaacactggagtgaaacctgagatcttgaag
aatgtaggcaaagcaattaccacctttccagaaaattttaagcctcacagagctgtaaag
aaggtctatgagcaacgtctacaaatgattgaaacaggggagggaattgattgggctgtt
ggagaggctcttgcttttgccacacttctagtagaaggcaaccatgttcgattgagtggt
caggatgttgaaagaggtacattcagtcaccgtcattcagtggttcatgatcaggaaact
ggggagaagtactgccccctggatcatgttgtcatgaaccaagatgaagagatgtttact
gtcagcaacagctctctttcagagttcggtgttcttggatttgaattgggttactcaatg
gaaagtccaaattctttggtaatctgggaagctcaatttggtgactttgctaatggggct
caagtgatattcgaccagttcctgagcagtggtgaatcaaaatggctgcgacaaactggt
cttgttttgcttcttcctcatggatatgatggccagggccctgaacattctagtgcacgg
ttggaacgattccttcagatgagcgatgacaatccttatgttatacctgagatggaacca
actcttcgtaagcaaatccaagaatgcaattggcaggttgtaaatgttacaacccctgcc
aattacttccatgttttgcgccgtcagatacacagagatttccgtaagcccctcgttgtg
atagctcccaaaaacctacttcgtcacaaggagtgcaaatcaaatctctcagagtttgat
gatgtacaaggccatcctggttttgacaaacaggggaccagatttaaacgtctcataaag
gatcggaatgaccactcagaccttgaggagggtatcaggcgtctggttctttgctctgga
aagatttattacgagcttgatgaagtgcgtggaaaggttgaggcaaaggacactgcaatt
tgtagggtggaacagctatgcccgttcccatatgatcttattcagcgtgagcttaagcga
tatccaaatgcggagattgtttggtgccaggaagagccaatgaacatgggcgcttacaat
tacattgctccacgactttccactgccatgaaagcactggaaagaggaacggtggacgac
atcaagtatgttggacgtgggccatctgctgcatcagccactggtttctaccaggtgcat
gtgaaggaacagactgaacttgtgcaaatggccatgcagcctgaaccaataaagtttcct
aactga
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