Populus trichocarpa (black cottonwood): 7490649
Help
Entry
7490649 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7490649 isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
7490649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7490649
03036 Chromosome and associated proteins [BR:
pop03036
]
7490649
03400 DNA repair and recombination proteins [BR:
pop03400
]
7490649
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
7490649
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
7490649
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
7490649
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
7490649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
7490649
NCBI-ProteinID:
XP_002300702
UniProt:
B9GQU6
LinkDB
All DBs
Position
2:1360703..1364325
Genome browser
AA seq
379 aa
AA seq
DB search
MPFDGFSPLISSQLQYLLNHFPHTIQIEQAWSGTRYFPGSLDRFTLLIPYCLDYIKWDII
YNAEFPLAAPDVIFGPEDDGFHPFIVVGREEGDSRLVKNSLTDWNNKDPSRLLALVMELR
DKYRSYQERRVGEVDDDRLKFEISTIVSREGIEMHMSSGVEKPGEVKFAVPLMDMNINKM
VLGCPWSHPQKIYLQVIYPVGRKYAPATSAPRLKLMCTPELKALFSIDEVKLPAWLDGMC
MAEYLPHLEELLQRQVLEAVTLIDVRRQFIEALSPVIGRPLEADPVFCRKASFLVCSGPF
TFLVHFFLSTQFPKQRPSLMFQSIQHFNSLGIPVKSPLITEYLWSPRWEPSQMAERISDF
LVDESLNFKRHCNESQLQH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgatggattctctcctctcatctcgtctcaactccagtacctcctcaatcac
ttccctcacacgatccagattgagcaggcttggtcaggcaccagatactttcctggaagt
cttgatcgattcacattgctcattccctactgtctagactacataaaatgggatattata
tacaatgctgaatttccattagctgcgccggatgttatatttggtcccgaggatgatggt
ttccatccatttattgtcgtaggaagagaggaaggggattcgaggctcgttaagaacagt
ttgactgattggaacaataaagatccttcacggctgttggctctcgtaatggaattgagg
gataaatataggtcttaccaggagagacgcgtgggagaagttgatgatgataggttgaag
tttgaaattagtactattgtatctagggagggaattgaaatgcatatgagttctggtgtt
gaaaagccaggggaggttaaatttgctgtgcctttaatggacatgaatataaataaaatg
gtgcttggatgcccctggagtcatccacaaaagatatacttacaggttatttatcctgtt
ggtagaaagtatgcacctgctacttcagcacctcgtctgaaattaatgtgcactcctgag
ttgaaagccctgttttctattgatgaagtcaaacttcctgcatggttggatggaatgtgc
atggctgaatatcttccccacctggaagaactccttcagagacaggtcttagaggcagtt
acgttaattgatgttagaaggcagtttatcgaggcattatctccagtaattggaaggccg
ctagaagctgatccagttttttgcagaaaggcttcatttcttgtctgttctggaccattt
acattcctggtgcattttttcctctcaactcagtttccaaaacagcggccttctctaatg
tttcaaagtattcagcatttcaattcccttggcatcccggtcaagtcacctctgattaca
gagtatctatggagtcctagatgggaaccctcacaaatggctgagcggatctctgacttt
ttggtggatgaatctctaaatttcaaaaggcactgcaacgaatctcaacttcaacactag
DBGET
integrated database retrieval system
