Populus trichocarpa (black cottonwood): 7494355
Help
Entry
7494355 CDS
T01077
Name
(RefSeq) uncharacterized protein At4g19900
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pop00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
7494355
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
7494355
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7494355
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
7494355
Glycosyltransferases [BR:
pop01003
]
Glycan extension
P blood group
7494355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
7494355
NCBI-ProteinID:
XP_002305683
LinkDB
All DBs
Position
4:complement(3126894..3128844)
Genome browser
AA seq
445 aa
AA seq
DB search
MYHQITKLKQNCFVCVKQLQNIKRSIFASLICLPTSLLALIFFLLLLYNGFAVFYVHLPF
PSKPQPEPANFSKANLAGNSLKKLPSSVMYAVKEDTPSVILKTLLPLLQNPAISVTPINH
SVVLKPKKAHGYKAVKRMLSSGDNSKQFSTRIRDFLGNRGCKVRFFMTWISSLKPFGDRE
LFAIESLFKSHPYACLVIVSNSMEAESGSLVLKPFLDKGFKLIAIKPDFDYIFKDTHAEK
WFKGLKKGNVSPGEVSLGQNMSNLLRLALLYKFGGIYMDTDVIVLKTLTKLRNAIGAQSI
DLENGKWSRLNNAVLIFDKKHPLLFKFIEEFALTFDGNKWGHNGPYLVSRVVSRVNRTPG
FNFTVLPPSAFYPVNWSRIKSLFKGPEGKAHSTWLRKKLEQIKSESFAVHLWNRQSRKIK
AESGSIINHIMLDCCVFCNSSSSSL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaccagatcaccaagcttaaacagaattgttttgtctgtgttaaacagttgcaa
aacataaaaagatcaatctttgcctctctcatttgcttaccaacttcactccttgctctt
atattctttctcctacttttgtacaatggtttcgctgttttctacgttcaccttcccttt
ccctccaaacctcagccagaacccgccaatttctccaaggccaatcttgctggaaattca
cttaaaaagctcccatcttcagtgatgtatgcagttaaagaagacacaccatcagttatt
ttaaagacccttttgcctctcttgcaaaatccagccatttcagtgacaccaattaatcat
tctgtggttttgaagccaaagaaggctcatggatacaaagctgtgaagagaatgctgagt
tctggagacaattcaaaacagttttcgacaagaataagagacttccttgggaatcgtggt
tgtaaggttaggttctttatgacatggatttcttctttgaagccatttggtgatagagag
ttgtttgctattgagagcttgttcaagtcccatccatatgcttgtttggttattgtttcc
aattccatggaggctgaaagtgggagtcttgttttaaagccatttcttgacaaagggttt
aaattgattgcaattaagcctgattttgattatatattcaaggatactcatgctgagaaa
tggtttaaagggttaaagaaagggaatgttagccctggagaagtttctttgggtcaaaat
atgtctaatttgcttaggcttgctttgctgtataagtttggtgggatttatatggacact
gatgtgatagtgttgaagacacttaccaaattgagaaatgctataggggcacaaagtatt
gatcttgaaaatgggaaatggagcagattgaataatgccgtgttgatttttgacaagaag
catcctttactcttcaaattcattgaagaatttgcactcacattcgatggaaacaagtgg
ggtcataacggtccttatctggtttcaagagttgtttcaagagtcaatagaacgcctggg
tttaacttcactgtattgcctccatctgcattttatccggtgaattggagtcgaattaaa
agtctctttaaggggcctgaaggtaaggcccattcaacatggctgcgtaaaaaacttgag
cagattaaaagtgaaagttttgcagttcacttatggaacaggcagagcagaaagatcaag
gccgaaagtggaagcattatcaatcatataatgttggattgttgtgttttctgcaattct
tcgagctcaagtttgtaa
DBGET
integrated database retrieval system
