Populus trichocarpa (black cottonwood): 7496048
Help
Entry
7496048 CDS
T01077
Name
(RefSeq) linoleate 13S-lipoxygenase 2-1, chloroplastic isoform X1
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00591
Linoleic acid metabolism
pop00592
alpha-Linolenic acid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
7496048
00592 alpha-Linolenic acid metabolism
7496048
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
7496048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
7496048
NCBI-ProteinID:
XP_002297796
UniProt:
B9GMA4
LinkDB
All DBs
Position
1:complement(1126817..1134294)
Genome browser
AA seq
902 aa
AA seq
DB search
MLKPQVSRQPNSTRTHLLFHKPSIQGSRHASFFLKSTSKFNIEAQKHFRVAFKPSEIKAI
ASVTEESTDIKVKAVVTVKQTIGGLITSVGIERGLDDIKDLLGKTLLLELVSAELDPKTE
LEKPTIQAFAHRIGGQVVEGDIRYEADFEVPLNFGEVGAIFVENEHHKEMFLQDIVLDGL
PHGAVNITCGSWVHSKYDNDRKRIFFTNKSYLPSQTPSGIRRLREEELVLLRGNGQGQRK
AGDRIYDYDVYNDIGNPDKKPELARPVLGGKEHPYPRRCRTGRPRCETDPSSEKRVSAFY
VPRDEAFSEVKQLTFSAKTLYSLFHALIPSIGNVIDDANLGFPYMTAIDSLFSEGIEMPP
LTKEGFWKEVMPRLFKVIAGGGDVLRFEVPKPMERDKFFWFKDEEFARQTLAGLNPYSIK
SVTEWPLKSELDPEIYGPPESAITSELLEAEIGGVTRVDKAIREKKLFILDYHDLLLPFV
SKVREIKGTTLYGSRTVFFLTPEGTLRPLAIELTRPPMDGKPQWKQVFTPCYHSTGCWLW
RLAKAHVLAHDSGFHQLVSHWLRTHCVTEPYIIATNRQLSVMHPIYRLLHPHFRYTMEIN
ALARESLINAGGIIETSFSPGKYSMEICSAAYDKLWRFDHEALPNDLISRGMAIEDLTAP
HGLKLTIEDYPFANDGLYLWDAINQWVSDYVNHYYPESGLLASDAELQAWWTEIRTIGHA
DKRDEPWWPELKTRHNLIDIITTIIWVASGHHAAVNFGQYPYAGYFPNRPTIARKKMPTE
DPTDEEWKLFLEKPEAVLLATFPSKLQATRVMAVLSVLSNHSPDEEYIGEGIEQAWADDP
IIKAAFEKFSGRLKELEGIIDERNANPKLVNRHGAGIVPYELLKPFSKPGITGKGVPYSI
SI
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaccgcaggtttctcgtcaaccaaactccacaagaactcacttgcttttccat
aagccatccatccaaggaagtcgacatgcttctttttttctcaaatcaacttccaaattc
aatattgaagctcaaaaacattttcgagttgcctttaaacctagcgaaattaaagccata
gcaagtgtcacagaggagagcactgacattaaagttaaagctgttgtgactgtaaaacaa
accattggtgggctcataacaagcgtagggattgaacgaggtctcgatgacattaaagac
ttgcttggtaaaacactcttgttagagcttgttagtgctgagcttgatcctaaaacggaa
ctagagaagccaactattcaagcgtttgcacatcgaataggcggccaagtagtggaggga
gatatcagatatgaagcagactttgaggttccattgaattttggagaggttggtgccatt
tttgttgaaaatgagcaccataaggagatgtttcttcaggacatagtgcttgatggttta
cctcatggcgcggttaatattacttgtggttcatgggttcattctaagtatgacaacgat
cgtaagagaatcttcttcaccaacaagtcatacttaccctcacaaacaccaagtgggatt
agaagattgagagaggaagagctcgtacttttgcgagggaatgggcaaggacaacgtaaa
gcaggggatagaatatatgattatgatgtgtataatgatataggtaatcctgataaaaaa
ccagagctagctagaccggtgctcggcggtaaagaacatccttaccctagacgttgccga
acaggacgaccacgatgcgagacagatccatcgtctgagaagagagttagtgccttctac
gttcccagagatgaagcattttctgaagtgaagcagcttaccttctctgccaagacatta
tactcattgttccacgccttgataccttctataggaaatgttattgatgatgcaaatctt
ggattcccatacatgactgcaatagactcactcttcagtgaaggaattgaaatgccacca
cttacaaaagaagggttttggaaagaagttatgccccggcttttcaaggtcatcgctggt
ggaggagatgtgctgcgatttgaagtccctaaaccaatggaaagagacaagttcttctgg
tttaaggatgaagaatttgctcgacagactcttgccggtctcaatccgtatagcatcaaa
tcggttacggaatggccactaaagagtgagcttgatccagagatctacggtccgccagaa
tctgcgattacctcagagctattagaggcagagattggaggggtaactagagttgataag
gccataagagaaaagaagctgttcatcctagattaccacgatctcttgttaccatttgtt
agcaaagtcagagaaatcaaaggaacaacgttatacgggtcgaggacagtgttcttccta
accccagagggcacattaaggccactagcaattgaactgactcgcccaccgatggacggg
aagcctcaatggaagcaagtgtttacaccgtgttaccattccacaggttgctggctctgg
aggctagctaaagctcatgtccttgctcatgactctggttttcatcaacttgttagccac
tggcttagaacacattgtgtgacagaaccttatataattgcaacgaatcggcagcttagt
gttatgcatccaatttacagactgttacatcctcattttcgatacacaatggagatcaat
gctttagctagagaatcattaatcaatgcaggtggtatcattgagacttcattctctcct
ggcaagtattctatggagatctgctctgctgcctatgataagctgtggcggtttgaccat
gaagcactacccaatgacctaatcagcaggggaatggcgattgaagatctaactgcccca
catggcctaaaacttacaatcgaagactaccctttcgccaacgatggtttgtatttatgg
gatgccatcaaccaatgggttagtgactatgtaaatcactactaccctgaatcaggttta
ttagcttccgatgcagagctccaagcatggtggactgaaattcggacaataggccatgct
gacaagagagatgaaccatggtggcctgaactcaaaacacgacataaccttatcgatatc
atcactactatcatatgggtggcctcaggtcaccacgctgcggtgaactttggacagtat
ccttacgcaggatactttcctaacaggcctaccattgccagaaaaaaaatgccaaccgaa
gaccctacagatgaagaatggaaacttttcttggaaaaacctgaagcagtactcttggca
accttcccttcaaaacttcaggcaacgagagtaatggctgtgttgagtgtgctatcaaac
cattctcctgatgaggaatatatcggggagggaatagaacaagcatgggcagatgatcca
attataaaggcagcttttgagaagttcagtgggaggttgaaagagttagaagggataatt
gatgaaaggaatgctaatccaaaattggtgaatagacatggagctggcattgtgccatat
gagcttttgaagcctttttctaagccagggataacaggaaagggagttccatatagtatt
tccatttga
DBGET
integrated database retrieval system
