Populus trichocarpa (black cottonwood): 7497350
Help
Entry
7497350 CDS
T01077
Name
(RefSeq) transcription factor UNE10
KO
K16189
phytochrome-interacting factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7497350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7497350
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
7497350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
POX
Motif
Other DBs
NCBI-GeneID:
7497350
NCBI-ProteinID:
XP_002320711
UniProt:
B9IBW9
LinkDB
All DBs
Position
14:complement(4156490..4161138)
Genome browser
AA seq
471 aa
AA seq
DB search
MSHQCVPSWEVDDNRTTAPKLSLRFHSNSSAPDMPMLDYEVAELTWENGQIAMHGLGPPR
VPAKPIASTSPSKYTWDKPRASGTLESIVNQATCVPQCNKATFDNSTGSDHDLIPWFNHH
KASASATMTMDALVPCSNRSDQGRTTHVIDSGPAGLGTCVVGCSTRVGSCSAPAATQDED
GLLTGKRARVARVPVPPEWSRDQSVNHSATFGKKDSQQMTVDSCEREFGVGFTSTSFGSQ
ENTSSGTNPCTKTLTADENDSVCHSRPQREAGKEDDKKKGNGKSSVSTKRSRAAAIHNQS
ERKRRDKINQRMKTLQKLVPSSSKTDKASMLDEVIEYLKQLQAQVQMMSRMNMQPMMLPL
ALQQQLQMSMMAPMSIGMAGMGMGMGVMDMNTIAARSNMTGIPPALHPTAFIPLTTWDGS
SGHDRLQTTAADPMSAFLACQTQPMTMDAYSRMAAMYQQLHQQPPASNSKG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcagtgcgttcccagctgggaagttgatgacaatcgcaccacagctcccaaa
ctctcccttcgcttccactccaattccagcgcaccagacatgcccatgttagactacgaa
gtagcagagctaacatgggagaacggccagatagccatgcacggcctaggaccaccgcgc
gtgccagccaaaccaatagcctccacttcaccctctaagtacacatgggacaagccacgc
gccagtggcacccttgaatccattgtcaatcaagctacatgtgtcccccaatgcaataaa
gcaacttttgacaacagtactggttcggaccatgacctcatcccatggtttaaccaccat
aaggcctcagcctccgccacaatgaccatggacgctttagttccttgctcgaaccggtct
gatcaaggccggaccacgcacgtgatagactccggcccagcgggattaggcacgtgtgtg
gtgggttgctccactcgtgtggggtcttgcagtgccccagctgccacgcaagacgaagat
ggtctcctcactgggaaacgtgcgagggtggcgcgtgtcccagtaccaccagagtggagc
agagaccaaagcgtcaaccatagtgccacttttggcaagaaggatagccagcagatgacg
gtggacagttgcgagagagagttcggtgttgggtttacctccacttcttttgggtcgcaa
gaaaacaccagctcaggcaccaacccatgtactaagacccttactgctgacgagaatgac
tcagtttgtcacagcagaccacagagggaggcaggcaaggaagatgacaagaagaaagga
aatgggaagtcctcagtttccaccaaaagaagcagggctgctgctatccataaccaatct
gaacgaaaaaggagagataagataaaccagagaatgaagacactacagaaattggtcccc
agttccagtaagacggacaaagcctcaatgcttgatgaagtgatcgaatatttgaaacaa
ttgcaagcacaagtacaaatgatgagcagaatgaatatgcaaccaatgatgctgccactg
gctttgcaacagcaactccaaatgtcaatgatggccccaatgagcatcggaatggccggc
atgggaatgggaatgggtgtcatggacatgaacacaattgcagctcgttccaacatgaca
ggaattcctccagcacttcaccccaccgctttcattcctctgactacatgggatggctca
agtggtcatgaccggttacaaaccacggccgcagacccaatgtctgcgttccttgcctgc
caaacacagccaatgacaatggatgcgtacagcaggatggctgccatgtaccagcagcta
catcaacaacctcctgcttctaattctaagggctaa
DBGET
integrated database retrieval system