Porphyrobacter sp. CACIAM 03H1: CBR61_16270
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Entry
CBR61_16270 CDS
T09981
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBR61_16270 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porc03400
]
CBR61_16270 (nth)
Enzymes [BR:
porc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CBR61_16270 (nth)
DNA repair and recombination proteins [BR:
porc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CBR61_16270 (nth)
Prokaryotic type
CBR61_16270 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASJ92708
LinkDB
All DBs
Position
3424786..3425460
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AA seq
224 aa
AA seq
DB search
MTRDQIFEFFRRLAEDNPSPQTELEYGNAYQLVVAVALSAQATDVGVNKATRALFAKVET
PQQMLDLGEKGLREHIKTIGLFNSKAKNVIALSQLLVDEYGGEVPATREDLVRLPGVGRK
TANVVLNCWFGQETFAVDTHIFRVGNRTGLAKGKTPDHVEAKLEKRVPQPFRLHAHHWLI
LHGRYVCKARSPECWHCKVEDLCSFRKKVTEPPKGRAAADGGMD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgaccagatcttcgagttcttccgccgcctcgccgaggacaatccctcgccg
cagaccgagctggaatatggcaatgcctatcagctggtggtggctgttgccctctcggcg
caggcgaccgacgtgggggtgaacaaggcgacccgcgcgctgttcgccaaggtcgagaca
ccgcagcagatgctcgatctcggcgagaaggggctgcgggagcacatcaagaccatcggc
ctgttcaactccaaggcgaagaacgtcatcgccctgtcgcagctgctggtcgacgagtat
ggcggcgaggtgccggcgacgcgcgaggatctggtgcgcctgccgggcgtggggcgcaag
accgccaatgtcgtgctcaactgctggttcgggcaggagaccttcgcggtcgacactcac
atcttccgggtcggcaaccgcaccgggctcgccaagggcaagacccccgatcacgtcgag
gccaagctggagaagcgcgtcccccagccctttcgcctccacgcgcatcactggctgatc
ctccacgggcgctatgtctgcaaggcgcgcagtcccgaatgctggcactgcaaggtcgag
gacctttgctcgttccgcaagaaggtgaccgagccgccaaagggccgcgcggcggcggat
ggcggcatggattaa
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