KEGG   Porphyrobacter sp. LM 6: BG023_117
Entry
BG023_117         CDS       T04468                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
porl  Porphyrobacter sp. LM 6
Pathway
porl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:porl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BG023_117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:porl03400]
    BG023_117
Enzymes [BR:porl01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BG023_117
DNA repair and recombination proteins [BR:porl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BG023_117
 Prokaryotic type
     BG023_117
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: AOL92966
LinkDB
Position
5851..6513
AA seq 220 aa
MTRDQIFEFFRRLAEDDPAPQTELEYGNAYQLVVAVALSAQATDVGVNKATRALFAKVTT
PQQMLDLGEEGLREHIKTIGLFNSKAKNVIALSQLLVNEYGGEVPDSREELVKLPGVGRK
TANVVLNCWFGHETFAVDTHIFRVGNRTGMAKGKTPDHVEAKLEKRVPQPFRLHAHHWLI
LHGRYVCKARTPECWRCKVADLCSFRKKVLEPPKGRAAAD
NT seq 663 nt   +upstreamnt  +downstreamnt
atgacccgcgaccagatcttcgagttcttccgccgcctcgccgaagacgaccctgccccg
cagaccgagctggaatatggcaatgcctaccagctggtggtggcggtagcgctgtcggcg
caggcgactgatgtgggggtgaacaaggctacccgcgcgctgttcgccaaggtgacgacg
ccgcagcagatgcttgacctcggggaagagggcctgcgcgagcacatcaagaccatcggc
ctgttcaactccaaggccaagaacgtgatcgccctctcgcagctcctggtcaacgaatat
ggcggagaagttccagacagccgcgaggagctggtcaagctccccggtgtcggccgcaag
accgccaacgtggtgctcaactgctggttcgggcacgagaccttcgcggtcgacacccac
atcttccgggtcggcaaccgcaccgggatggccaagggcaagacccccgatcatgtcgag
gccaagctcgaaaagcgcgtgccccagcccttccgcctgcacgcccaccactggctgatc
ctgcacggccgctatgtctgcaaggcgcgcacgcccgaatgctggcgctgcaaggtcgcc
gatctgtgcagcttcaggaagaaggtgcttgagccgcccaagggccgcgcggccgccgat
taa

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