Panulirus ornatus (ornate spiny lobster): 139746300
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Entry
139746300 CDS
T10834
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04120
Ubiquitin mediated proteolysis
porn04140
Autophagy - animal
porn04144
Endocytosis
porn04517
IgSF CAM signaling
porn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139746300
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139746300
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139746300
04140 Autophagy - animal
139746300
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139746300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139746300
04121 Ubiquitin system [BR:
porn04121
]
139746300
Enzymes [BR:
porn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139746300
Membrane trafficking [BR:
porn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139746300
Ubiquitin system [BR:
porn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139746300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-TRAF_2
Sina_ZnF
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
139746300
NCBI-ProteinID:
XP_071513503
LinkDB
All DBs
Position
64:complement(4040164..4055947)
Genome browser
AA seq
575 aa
AA seq
DB search
MESGDADPIAIMTRQEGYDYEFVPPLDPKYECAICLLGLRSPVQTTCGHRFCKECIFNSI
SESSNRCPIDNLPLSETDLFLDSCAEREILQLCIKCPNHALGCTRIVELMYIEHHTQACS
FQPVMCPNECSATVLQKELEQHLTFECVLRVKKCDLCDEPYTFNQEQLHLLTCVHVIVAC
EMCGTLMARGDIATHMTESCPKVVVACTFAEHGCHHKMTRADLDQHMAQETQFHLFLLSS
GYKKINAFVSELSRTVGVIQSPFGSFSRQPSLRSQISATSPIPENHTSPSHPERTLEKSL
SPSGAVGGSEKPPVFPLLQPGDKGTDSGIEVNKLQLNLNHLNICDGAKGSSKLSTSSLTQ
QEIILRNLCEKSVDLSQSMVEETIKHNNLAKRIEEIDAYVESQLAELSGKFCNGEFVWRI
RNFSQFCAELQNKPGRVCHSPPFYTSPFGYKFCLRTNITCKSNEYFLALFIHTMQGDNDD
FLEWPFNGRITLSILDCGSVVPKQHITETMMSKPDRQAFMRPEVSRNLKGFGYTDFVALK
RILETENGNYVKNNTLCIRAVVCPGMATNKQIECI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggagacgccgatcctatagccatcatgacccgacaggaaggttatgactac
gagtttgtgcctccactcgaccccaagtatgagtgtgctatttgtcttctgggtctgagg
tctccagtacagactacttgcggacaccgcttttgtaaagaatgcatctttaatagcata
agtgaaagcagtaatcgttgcccaattgacaacttgccactctcagaaacagatttgttt
cttgactcatgtgctgaaagggagatcctgcagctgtgcattaaatgtccaaatcatgct
cttggttgcacacgaatagtagaacttatgtacatcgagcatcatactcaggcttgctcc
ttccaaccagtgatgtgccccaatgaatgttcagccactgtacttcaaaaagaactggaa
cagcatttgacatttgaatgtgttctaagagtcaaaaagtgtgatctctgtgatgaacca
tacactttcaaccaagagcagcttcatttgttgacctgtgttcatgtgatagtggcatgt
gagatgtgtgggacattgatggcacgtggtgatattgctacccacatgactgaatcctgc
cctaaagtagttgttgcatgcacctttgctgaacatggctgccaccataagatgactcgg
gctgacctagatcaacatatggcacaagaaacccagtttcatctctttctgttgtcatca
ggttacaagaaaatcaatgccttcgtatctgagttaagtcgaacagttggtgtaatacag
tctccttttggaagcttcagtcgtcagccaagtttaagaagtcaaatatctgctacatct
ccaattcctgaaaatcatacaagtccatcacatcctgaaagaacattagagaaatcttta
agcccatctggagctgttggaggctcggaaaaaccaccagtatttcccttgttacaacct
ggagacaaaggaacagactcagggatagaagttaacaagctccagttgaatcttaatcac
ctgaatatttgtgatggtgccaaaggatcttccaaattatccacctcttcattgacccag
caagagataatactgcgcaatttatgtgaaaagagtgttgatctgagccagagtatggtg
gaggagactatcaaacataataatctagccaagagaattgaagaaattgatgcttacgtc
gaatcgcagctggctgagttaagtgggaagttttgcaatggtgaatttgtatggagaata
aggaatttttctcaattttgtgctgaattgcaaaataagcctgggagagtctgccacagc
ccacctttttatacttctccttttggatataaattctgccttcggacaaatattacatgt
aagtccaatgaatattttctagccctgtttattcacacaatgcagggtgataatgatgac
ttccttgaatggccttttaatggacgaataacactttctatcttagactgtggctcagtc
gtacccaagcagcacataactgagacaatgatgagtaagccagatcgacaagcatttatg
cgaccagaagtttctcgtaatcttaaaggctttggatacactgattttgtagctctcaag
agaatactcgagacagagaatggaaactatgtcaagaataacacgctttgtatccgtgca
gtggtttgtccaggaatggcaactaataaacaaatagaatgcatttag
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integrated database retrieval system
