Panulirus ornatus (ornate spiny lobster): 139746300
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Entry
139746300 CDS
T10834
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04120
Ubiquitin mediated proteolysis
porn04140
Autophagy - animal
porn04144
Endocytosis
porn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139746300
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139746300
04140 Autophagy - animal
139746300
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139746300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139746300
04121 Ubiquitin system [BR:
porn04121
]
139746300
Enzymes [BR:
porn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139746300
Membrane trafficking [BR:
porn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139746300
Ubiquitin system [BR:
porn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139746300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-TRAF_2
Sina_ZnF
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
139746300
NCBI-ProteinID:
XP_071513503
LinkDB
All DBs
Position
64:complement(4040164..4055947)
Genome browser
AA seq
575 aa
AA seq
DB search
MESGDADPIAIMTRQEGYDYEFVPPLDPKYECAICLLGLRSPVQTTCGHRFCKECIFNSI
SESSNRCPIDNLPLSETDLFLDSCAEREILQLCIKCPNHALGCTRIVELMYIEHHTQACS
FQPVMCPNECSATVLQKELEQHLTFECVLRVKKCDLCDEPYTFNQEQLHLLTCVHVIVAC
EMCGTLMARGDIATHMTESCPKVVVACTFAEHGCHHKMTRADLDQHMAQETQFHLFLLSS
GYKKINAFVSELSRTVGVIQSPFGSFSRQPSLRSQISATSPIPENHTSPSHPERTLEKSL
SPSGAVGGSEKPPVFPLLQPGDKGTDSGIEVNKLQLNLNHLNICDGAKGSSKLSTSSLTQ
QEIILRNLCEKSVDLSQSMVEETIKHNNLAKRIEEIDAYVESQLAELSGKFCNGEFVWRI
RNFSQFCAELQNKPGRVCHSPPFYTSPFGYKFCLRTNITCKSNEYFLALFIHTMQGDNDD
FLEWPFNGRITLSILDCGSVVPKQHITETMMSKPDRQAFMRPEVSRNLKGFGYTDFVALK
RILETENGNYVKNNTLCIRAVVCPGMATNKQIECI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggagacgccgatcctatagccatcatgacccgacaggaaggttatgactac
gagtttgtgcctccactcgaccccaagtatgagtgtgctatttgtcttctgggtctgagg
tctccagtacagactacttgcggacaccgcttttgtaaagaatgcatctttaatagcata
agtgaaagcagtaatcgttgcccaattgacaacttgccactctcagaaacagatttgttt
cttgactcatgtgctgaaagggagatcctgcagctgtgcattaaatgtccaaatcatgct
cttggttgcacacgaatagtagaacttatgtacatcgagcatcatactcaggcttgctcc
ttccaaccagtgatgtgccccaatgaatgttcagccactgtacttcaaaaagaactggaa
cagcatttgacatttgaatgtgttctaagagtcaaaaagtgtgatctctgtgatgaacca
tacactttcaaccaagagcagcttcatttgttgacctgtgttcatgtgatagtggcatgt
gagatgtgtgggacattgatggcacgtggtgatattgctacccacatgactgaatcctgc
cctaaagtagttgttgcatgcacctttgctgaacatggctgccaccataagatgactcgg
gctgacctagatcaacatatggcacaagaaacccagtttcatctctttctgttgtcatca
ggttacaagaaaatcaatgccttcgtatctgagttaagtcgaacagttggtgtaatacag
tctccttttggaagcttcagtcgtcagccaagtttaagaagtcaaatatctgctacatct
ccaattcctgaaaatcatacaagtccatcacatcctgaaagaacattagagaaatcttta
agcccatctggagctgttggaggctcggaaaaaccaccagtatttcccttgttacaacct
ggagacaaaggaacagactcagggatagaagttaacaagctccagttgaatcttaatcac
ctgaatatttgtgatggtgccaaaggatcttccaaattatccacctcttcattgacccag
caagagataatactgcgcaatttatgtgaaaagagtgttgatctgagccagagtatggtg
gaggagactatcaaacataataatctagccaagagaattgaagaaattgatgcttacgtc
gaatcgcagctggctgagttaagtgggaagttttgcaatggtgaatttgtatggagaata
aggaatttttctcaattttgtgctgaattgcaaaataagcctgggagagtctgccacagc
ccacctttttatacttctccttttggatataaattctgccttcggacaaatattacatgt
aagtccaatgaatattttctagccctgtttattcacacaatgcagggtgataatgatgac
ttccttgaatggccttttaatggacgaataacactttctatcttagactgtggctcagtc
gtacccaagcagcacataactgagacaatgatgagtaagccagatcgacaagcatttatg
cgaccagaagtttctcgtaatcttaaaggctttggatacactgattttgtagctctcaag
agaatactcgagacagagaatggaaactatgtcaagaataacacgctttgtatccgtgca
gtggtttgtccaggaatggcaactaataaacaaatagaatgcatttag
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integrated database retrieval system
