Panulirus ornatus (ornate spiny lobster): 139755553
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Entry
139755553 CDS
T10834
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139755553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139755553
03032 DNA replication proteins [BR:
porn03032
]
139755553
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139755553
mRNA cycle factors
Common to processing body (P body) and stress granule
139755553
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
139755553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
139755553
NCBI-ProteinID:
XP_071530100
LinkDB
All DBs
Position
19:60195611..60263714
Genome browser
AA seq
1735 aa
AA seq
DB search
MITSKGGYEDAVCMPEEKEGTQLSVSEKGRTRKSKKPEIQIYRPGALRHKRSCQSGDQTV
CITQVQNVRKPLDTKQGARDDMQRHENMKKIPVKGRQESSQENKISKEHSSGGRIRSKEV
DKQSLRKGENLVSEANEDCSKKETKGGNPSQEHRQDCMHLIKEENSLNIAPKEQQKLIKV
GKLLKSKEKQTTNENISAKENVKHDDWKDGKNNCEKLKNQEESTSSNKSVFDSPDVVSEK
DLALPDADCAEIKNSEKEANPVFMLENYNKVTLERNVNRKNDRNAPGKYPFKRDGKGLSR
KSADVKSEPSFCDKSVTKTDQREVSERLPGKNFHSQYERSRGNRSGIEYTDCTTKGDEVT
ETEKNLHGRANEKGEKFITNRTPVRRSEVSRPDKPAGKSDKAKFNDKLSFKERENTGETG
FIKQHKKDAVRIHDGISKSDKSYKVNCDYQRRETYKGSQTSSLKNGYFEKESSTEKELSS
QPAKPYTSLDFDSYQGSESDKKKEENVITVSELAAKVDELATGKLSGKPMTLKKKVKGWH
DTGRDGKQYLRDVNKCTSVEDQYLKNISVPQDEIKAANKIESKNAPSNIATQDFSEKSSR
AKSYSSARENRRNRGNKFFNQGTSQGNQREELKIEVTVHKNSHERTTRVRQISESDTDEL
ENRPQTGRERLCGRNTSEGSSFSQKQVSSIKMKSGEPCKTTEFIYVPEDKCSPGENHIDD
QGMDSMIFIDVPEDDWGEEVDRDMTWCNQHERGVGSPTWDDEKLSWRRKREKHHPENEDS
LRRVESPCRRGGLIQLSATVSGSDITCPEPTVSYQMTNSAPLLQKHLYNPSNPSKPVPVV
PSARDLLASRDPQREGSKGLGDISGPLLVQSSHVSEYALEGHSPKIDLSILYNVQKGEMD
INYYVSSNQLPVEFRRIMDIRHHLQGCYKQLLVSDIRMCQEKNVEGSLWKTLYYVIIEKL
REYISRDPSLKDRSLSTLLMLVDEGQRYLQDLLEALQQEYGFTLEDHLEDEGSSHTEIRG
RVRMALMSAQKLLLSLGDLARYREQYSSTPNFTLAKKWYQMALQVHPRNGRPFNQLAIIA
VNQKRPLDVVYYYVRSLTASNPFMSARDSLVSMFDDIRKKYISAQHNEPISKSMQTAVGR
AVNNEGLRQEIWIRPDSGATNCRTLSHSSNDEDTSKEDELKKLSLEQIMKRFLTSYLHCH
GMLFSRVGLDGFRECCLSMLLEFSMLLRASPPRLSTYHLLQIITINMYAVSNTELKDARV
GSGYRSVAQELALVLAQEMFGQLVQLVVELLPHHVQQHHHQQQHQVDQPPAAVDPQRLFT
PTLAHFMPALKAWCDWLLYHSAAWNPPPAAHEYSTTRHGEDTWSSVAELATILRGFGPPD
VSLTEAPAAGVIEVGGPDLVPLRLTEDTFLRGYEPLLPAHATVTYASPLVHTGRACDWLR
VVRLQTCLCQFLCGVEPPVLRLQKTDLGHILVSVVANSPPHTPTTTTTTLSLSTSDVEVE
DSLSESDASEMEDEPEAVIEEEDTPLASTVRLLTQRKKVLERKQRQQRKLQSILEGSVTL
EMEVRPRYLVPDTNCFIEHLEVVQALVNSAPYTVMVPLVVLNELDGLSRDAAVAKYGSVG
HAVRVREGAAAALHYLRDSKPHSLKCVTSQGSVLSSTTFTAEIDMPDATNDDKILSCCVH
FCSDSTQRRPIRAGVRRLYREVVLLTEDRNLRVKAHARDIPVRDLLDFARWAGVR
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgattacatcaaaaggtggatatgaagatgctgtgtgcatgcctgaggagaaagaaggt
acacaattaagtgtttctgaaaaaggacgaacacgaaaatctaaaaagccagaaatccag
atatatcgacctggagcccttcggcataaaagatcttgtcagtcaggtgaccagacagta
tgcatcactcaggttcaaaatgtaagaaaaccattggacaccaagcaaggtgccagagat
gatatgcaaaggcatgaaaatatgaaaaagatacctgtgaaaggtagacaggaatcatca
caggagaacaaaatcagtaaagaacacagtagtggaggtagaataagatccaaggaagta
gataaacagtctttaagaaagggagaaaatttggtttccgaggctaatgaagactgcagc
aaaaaagaaaccaagggaggtaatccatcccaagaacatcgacaggattgcatgcatctt
ataaaagaggagaattctttgaacatagctccaaaggaacagcagaaacttattaaagta
ggaaaacttttgaaatccaaagaaaaacaaactactaatgaaaatatttctgctaaagaa
aatgttaaacatgatgactggaaagatggcaagaataactgcgaaaaactgaaaaatcaa
gaagagagcacttcctcaaataaaagtgtgtttgactctcctgatgtagtttctgaaaaa
gatcttgctcttcctgatgctgactgtgcagaaatcaaaaacagtgaaaaagaagcaaat
cctgttttcatgttggaaaattacaataaagtcactttagaaagaaatgtaaacaggaag
aatgacagaaatgcacctggaaaatatccctttaagagggatggaaaaggcttatctaga
aagtcagcagatgtaaaaagtgagccttcattttgtgataaatcagtaacaaagacagac
caacgtgaagtatcagagagattacctggaaagaatttccactcccaatatgaaagatca
aggggaaatagaagtggaatagagtatactgattgtacaacaaagggtgatgaagtaacg
gaaactgaaaagaatttacatgggagagcaaatgaaaaaggtgaaaaatttattactaac
agaacaccagttaggaggagtgaagttagtaggccagataagccagcaggaaaatcagat
aaggccaagtttaatgataaattgtctttcaaagaaagagaaaatacaggtgaaacaggg
tttattaaacagcataaaaaagatgctgttagaattcatgatggtatttcaaaaagtgat
aaaagttataaagtaaattgtgattatcagaggagagaaacctataaaggcagtcagacc
agttctcttaagaatggatattttgaaaaagagtccagcacagaaaaggagttaagtagt
cagcctgctaagccttatactagtttggactttgacagttaccaggggtctgagagtgac
aagaaaaaagaggaaaatgtaataactgtgagtgaattggctgctaaagtggatgaacta
gccactggaaaattatcagggaaaccaatgactttaaaaaagaaggttaaagggtggcat
gatactgggagagatgggaagcagtatcttagagacgtgaataagtgtacttcagtggag
gatcagtatcttaagaatatttcagttcctcaggatgaaattaaggctgcaaataagatt
gaatcaaagaatgctccatccaacatagctacacaggattttagtgaaaagtcttctaga
gcaaagagttattccagtgcaagagaaaatagaagaaacagaggaaacaaattttttaac
cagggaaccagtcagggcaaccaaagggaggaactaaaaattgaagtgactgttcataaa
aacagtcatgaaagaacaacacgtgtgagacaaataagtgaatcagatacagatgaattg
gaaaatagacctcaaactggacgggaaagattatgtggaagaaacacaagtgaaggatcc
tctttctctcagaagcaggtatccagcattaaaatgaagtcaggagagccatgcaaaaca
actgaatttatttatgttccagaagacaaatgcagtcccggagaaaatcatattgatgat
caagggatggattcaatgatctttattgatgtaccagaagatgactggggagaagaagta
gacagggatatgacttggtgtaatcagcatgagagaggggttggatcacctacctgggat
gatgaaaaattatcatggaggaggaagagggagaaacatcatcctgagaatgaagactca
ctgagaagagtagagagtccttgccgtagaggaggactgattcagttgtcagctacagtg
tcaggttctgatattacttgcccagaacccactgtttcataccagatgactaactcggca
cctttgttgcagaaacacttgtataacccgagcaacccaagcaaacctgtgccagtagtc
ccaagtgctcgagatttattggcatcccgggatcctcagcgtgaaggaagtaagggatta
ggggatatttctggtcctttacttgtgcagagtagccatgttagtgaatatgcccttgaa
ggtcatagtccaaagattgatctcagtatcctttataatgttcagaagggtgaaatggac
attaactattatgttagtagcaaccagctgccggtggaattccgtcgcataatggatatc
cgccatcacctgcagggatgttataaacaactcttggtatctgatatccgcatgtgtcaa
gaaaaaaatgttgaaggtagcctttggaaaactctctattatgttatcattgaaaagctg
cgggaatacataagcagagatccgagtttgaaagatcgaagcctttctacactcttgatg
ttagtagatgagggccagcgctatctccaggacttgttagaggctcttcagcaagaatat
ggctttactttagaagatcatttggaggatgaaggctcttcacatacagagatccgtggt
agagtgcgtatggcactgatgtctgctcagaagcttcttctttcacttggagatttagca
cgataccgagaacagtacagttccactccaaactttactttagcaaagaaatggtaccag
atggctcttcaggtacaccctcggaatggaagaccattcaaccagttggcaattattgca
gttaatcagaagaggcctctggatgtagtgtattattatgtacgttccctgaccgcctcc
aacccattcatgtcagcacgtgattccctcgtctcaatgtttgatgacattagaaaaaag
tacatctcggcacagcataatgaaccaatttctaagagcatgcaaacagccgtaggccgg
gctgtaaataatgagggattgagacaagaaatatggattcggccagacagtggagctaca
aattgtcgtactctctctcattccagcaatgatgaagacacaagtaaagaagatgaattg
aagaagttgtcacttgagcagattatgaagagattccttacaagctaccttcactgccat
ggaatgctgttttcacgggttggtttggatggattccgagagtgttgtttgagcatgttg
ctggagttttctatgttgcttcgtgcatctcctccacgactctcaacttatcacctactc
cagattataaccatcaatatgtatgcagtcagcaacactgagctgaaggatgcacgggta
ggtagtggataccggtcggtggcacaagagttggcattagttttggcacaagaaatgttt
gggcagctagtgcagcttgtggttgaactgctaccccatcatgtccagcagcaccatcac
cagcagcagcatcaggtagaccagccaccagcggcggtggacccccagcggctctttaca
ccaaccctggctcacttcatgcctgccctcaaggcttggtgtgactggctgctgtaccac
agtgctgcatggaacccaccacctgctgcccatgagtactccaccacaagacatggtgaa
gacacatggtcgagtgtggctgagttggccaccatcctacgaggttttggccctccagat
gtatccttgacggaagcacctgcagctggtgttattgaggtcggtggaccggacctagtt
cccctccggctcacagaggacaccttcctcaggggctacgagcctcttcttccagcccat
gctaccgtcacctatgcttcccccctggtgcacacgggtcgggcatgcgactggttgcgg
gtggtgcggctacagacgtgcctctgtcagttcctgtgtggtgtggaaccacctgtcctg
cgccttcagaagactgacctaggccatattctggtctctgtggtggccaactctccccct
cacacacccaccaccaccaccaccacgctgtcactgagcacatcagatgtggaggtggag
gactcccttagtgaaagtgatgcttccgaaatggaggatgagccagaagcagtgatagag
gaggaggatacaccacttgcttccactgttagattgctcacccagaggaagaaagttctg
gagaggaagcaaagacaacagcgtaagttgcagagcatcttagagggttctgttactctg
gagatggaggtgcggccacgctacctggtgcctgacaccaactgtttcatcgagcacctg
gaggtggtgcaggcccttgtcaacagtgccccatacactgtcatggtacctctggtggtt
ctgaatgagctagatggactgtcgcgggatgctgctgtagccaaatatggctcagtgggt
catgcggtgcgggtgcgggagggtgctgctgctgcacttcactacttgcgggactccaag
ccgcactccctcaaatgtgtaacttcgcaggggtctgtcctctcctccaccaccttcact
gctgaaatcgacatgccggatgccaccaatgatgacaagatcctctcttgctgtgtccac
ttctgtagtgactctacacagcgacgacccatcagagctggtgtgcgacggttataccga
gaggtagtgcttttgacagaagatcgcaatttgagggtgaaggctcatgcacgtgatata
cctgtgcgagatcttttagattttgcacgttgggcaggagttaggtga
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integrated database retrieval system
