Panulirus ornatus (ornate spiny lobster): 139756341
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Entry
139756341 CDS
T10834
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139756341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139756341
Spliceosome [BR:
porn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139756341
Complex C
U5 SnRNP specific factors
139756341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
139756341
NCBI-ProteinID:
XP_071531798
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Position
21:7882723..7891935
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AA seq
975 aa
AA seq
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MDVDLYDEFGNYIGPELDSDDEDDEEDEEDYPDQDQEANGFDDDDGVGGEEEEVSAQAVV
LHEDKQYYPSAADVYGPEVETIVQEEDAQPLTQPIVQPVKVKKFSHVEKDLPATCYNLEF
LADLMDSPSLVRNISLVGHLHHGKSTFVDCLVHQTHPEFRSKEDVPVRYTDTLFTESERG
LSIKATPITLVMQDVRDKSYLMNIFDTPGHVNFSDEVTAAMRLSDGVVLFVDAAEGVMLN
TQRLLKHAVQERLAITVCINKVDRLILELKLPPQDAYYKLRHIVEEINSLLQQYTDQENP
QTISPLLGNVCFASSQYSLCFTLKSFAKIYSQHYGYDLPLEDFARRLWGDIYFNPRTRKF
TKKPPTSTAQRSFVEFILEPLYKIFAHIVGDVDTHLVSLMDELGIHMSKEEQRMNIRPLL
KLFMTKFTGDFEGFVDMCVQHIPSPQSYGKQKVETTYTGPLDTELSENMMLCDPDGPLVV
HTTKQYPNEDATAFHVFGRVLSGTIHANQDVRVLGEKYTLMDEEDSRILTVGRLWVSEGR
YNIEVNAVPAGNWVLIEGIDEPIVKTATITDLPPSSELHIFRPLKFNTQSVIKIAVEPVN
PSELPKMLDGLRKVNKSYPLLSNKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVA
DPVVSFCETVVDTSSLKCFAETPNKRNKITMIAEPLERGLAEDIEGEVVQINWDRRRLGE
FFQTRYDWDVLAARSIWAFGPDHSGPNILVDDTLPSEVDKNLLSSVRDSVVQGFQWGTRE
GPLCEEPIRNCKFKILDAVIAEEPLHRGGGQVIPTARRVAYSAFLMATPRLMEPYYFVEI
QAPADCVSSVYTVLTKRRGHVTQDAPVAGSPLYTIKAFIPAIDSFGFETDLRMHTQGQAF
CLSVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDP
MLLELARQDVTLNYA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatctgtatgatgagtttggtaactacattgggccagagcttgactctgat
gatgaagatgatgaggaagatgaagaggactatcctgaccaggaccaggaggcaaatggt
tttgatgatgatgatggtgtagggggtgaggaggaggaggtatctgcccaggcagtggtt
ctgcatgaagacaaacagtattatccaagtgctgctgatgtgtatggaccagaagttgaa
accattgtgcaggaggaggatgctcaaccattgacacagcccattgttcagcctgtaaag
gtgaaaaagttcagccatgtagagaaagatttgccagccacctgttacaaccttgagttt
ttggctgatcttatggacagcccatcattagttcgtaacatatccttggttggtcatctt
catcatggcaagagcacctttgttgactgtcttgtgcaccagacacacccagaattcagg
agtaaagaggatgtccctgtgcgatacacagatacactatttactgagagtgaacggggg
cttagcatcaaggccactcccattacacttgtaatgcaggatgtgcgtgataagagctat
cttatgaacatctttgatacgcctggtcatgtcaatttctctgatgaggtgactgcagca
atgcgattaagtgatggtgtggtgttgtttgtagatgctgcagaaggtgtaatgctcaat
acacagagactcttgaagcatgctgtgcaagaacgacttgctatcactgtgtgcatcaac
aaagtggatcgccttatacttgagctaaaacttcctcctcaggatgcttactacaaatta
agacatatagtggaagagataaactctcttcttcagcaatacacagaccaggagaatcca
caaactatctcccccctgctaggcaatgtttgctttgccagctctcagtattctctttgt
tttacactcaagtcctttgctaagatctattcccagcattatggctatgatctgccactg
gaggactttgctagacggctatggggtgacatatacttcaaccctcggaccagaaaattc
acaaagaaacccccaacatcaacagcacaaaggagttttgttgaatttatcctcgaacct
ttgtacaaaatttttgctcatattgttggtgatgtagatacccatcttgtgtcattaatg
gatgagttgggtatccacatgagtaaagaggaacaaagaatgaacattagaccattgctg
aaactcttcatgactaaattcactggagactttgaaggatttgttgatatgtgtgttcaa
cacattccatctcctcagtcatatgggaaacagaaagtggaaacaacatacactgggcca
ctagatacagagttgtcagagaatatgatgctttgtgacccagatggtccattagttgtt
cacaccaccaaacagtatcccaatgaagatgcaactgcttttcatgtatttggccgagtt
ctctctggaaccattcatgcaaatcaagatgttcgtgttctgggtgagaaatatacactg
atggatgaagaggactcacgcatactaactgttggaaggttgtgggtgtctgaaggcagg
tacaatatagaggtgaatgctgtacctgctggaaattgggttttgattgagggtattgat
gagcctatagtaaagactgctaccatcacagatcttccacccagtagtgaactccacata
tttcgacccttaaagtttaatacccaatcagtcataaaaattgcagttgagccagtgaat
ccctctgagttacccaagatgttagatggccttcgtaaagtaaataaatcatatccatta
ttgagcaataaagtagaagagtctggagaacatattattcttggaactggagaattgtat
ttggattgcgttatgcatgacttacggaagatgtattcagagattgacatcaaggtagct
gaccctgtggtcagtttctgtgagactgttgttgatacatcctcactcaagtgttttgca
gaaactcccaacaaaagaaacaagatcactatgattgctgaaccactagaaagaggtttg
gctgaagatattgaaggagaagtagtgcagataaattgggataggagacgacttggtgag
ttcttccagacgcgatatgactgggatgtactagctgctcgatccatttgggcttttgga
cctgatcacagtggcccaaacattttagttgatgacaccttaccatcagaagtagataaa
aaccttttgtcatctgtaagagattctgttgttcaaggttttcagtggggtacaagagaa
ggccctctttgtgaagagccaataagaaattgtaagttcaaaattttagatgcagtcatt
gctgaggaacctctacaccgtggtggtggccaagtcattccaactgcaaggagagtagca
tattcagccttcctgatggcaacacctcgtctcatggagccttattactttgtcgagata
caagctccagcagattgtgtgtcatcagtgtatactgtcctaacaaaacgacgtggacat
gtaacacaggatgctccagtggctgggtctccactgtatacgatcaaggcttttatacct
gccattgattcctttggatttgaaacagacttgcgtatgcatacccagggtcaggccttt
tgtttaagtgtttttcatcattggcagattgtgccaggtgatccattagataagagcatt
gtaattcgtcctttagagccccagcctgcaactcacttggctcgtgagttcatgatcaaa
actcggagaagaaaaggcttgtcagaggatgtgtcgattaacaagttcttcgatgatcct
atgttgttggaacttgccagacaagatgtgaccctcaactatgcttaa
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