Pseudomonas oryziphila: EJA05_19400
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Entry
EJA05_19400 CDS
T07791
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pory
Pseudomonas oryziphila
Pathway
pory00020
Citrate cycle (TCA cycle)
pory00785
Lipoic acid metabolism
pory01100
Metabolic pathways
pory01110
Biosynthesis of secondary metabolites
pory01120
Microbial metabolism in diverse environments
pory01200
Carbon metabolism
pory01210
2-Oxocarboxylic acid metabolism
Module
pory_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pory_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EJA05_19400
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EJA05_19400
Enzymes [BR:
pory01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
EJA05_19400
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AZL69753
UniProt:
A0A3Q8U246
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All DBs
Position
complement(4128904..4131735)
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AA seq
943 aa
AA seq
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MQESVMQRMWDSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGSTATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAKLDPLGLWQ
RPAPVDLSINHYGLTNADLDTTFRAGDLFFGKEEASLREIFEALQKTYCRTIGAEFTHIV
DSEQRSWFQQRLESVRGRPEFSADVQAHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDEMIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKMNELGSGD
VKYHQGFSSNVMTPGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDTVGDKVLPISI
HGDAAFAGQGVVLETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDSRSTEYCTDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPNGTQPLMY
QQITKQRTTRELYADQLISAGRIDAERAQAKIDEYRNALDNGLHVVKSLVKEPNRELFVD
WRPYLGHAWTARHDTRFDLKTLQDLSAKLLELPEGFVVQRQVSKIYEDRQKMQAGGLPIN
WGYAETMAYATLQFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDASTYVPLQNLFPGQPKF
ELYDSFLSEEAVLAFEYGYSTTTPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAISTLEDLAEGSFQTVIPEIDTLDPAKVERLILCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLIEILAPYTNLKHAVWCQEEPMNQGAWYSSQHHMRRI
LGRHNKALVLEYAGRDASAAPACGYASKHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtgggatagcgcccacctttcaggtggtaacgct
gcatatgtggaagagctttatgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacttacttccagaagttgcccgccgacggcagcaccgctaccgatgtatcgcac
tcgacaatccgcgaccatttcgtactgctggcaaagaaccagcgccgcgcccaaccggtt
tccgccgggagcgtgagcagtgaacacgagaagaagcaggttgaagtgctgcgactgatc
caggcctatcgtatgcgcggccatcaggctgccaagctcgacccgttggggttgtggcag
cgtcctgcgcccgtagacctgtcgatcaatcactacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcttcggcaaagaggaagcgagcctacgcgaaatc
ttcgaagcgctgcagaagacatattgtcgcaccattggcgccgagttcacccacatcgtc
gattccgagcagcgcagctggttccagcagcgtctggaaagcgtgcgtggccgtcctgaa
ttctccgccgacgtgcaggcacacctgctcgagcgcgtcacggccggtgagggcctggag
aagtacctgggcaccaagtacccaggcaccaagcgcttcggcctggaaggcggcgaaagc
ctgatcccgatgctcgacgagatgatccagcgttccggctcgtacggcaccaaggaagtc
gtgatcggcatggcccaccgtggccgcctgaacgtgctcgtcaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagatgaacgagctgggctccggtgac
gtgaagtatcaccagggcttctcctccaacgtgatgaccccgggtggcgaagttcacctg
gccatggcgttcaacccttcccacctggaaatcgtctcgccagtggtggaaggttctgtg
cgtgcccgtcaggaccgtcgcaacgacacggtcggtgacaaggtactgccgatctcgatc
cacggtgacgccgcattcgccggccaaggcgtggtgctggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggtaccgtgcacatcgtgatcaacaaccaggttggtttc
accatcagcaacccgctggactcgcgttccaccgagtactgcaccgacgtcgccaagatg
atccaggcgccgatcctgcacgtgaacggtgatgacccggaagccgtgctgttcgtgacc
cagctggccatcgactaccgcatgcagttcaagcgtgacgtggtcatcgacctggtctgc
taccgtcgtcgcggccacaacgaggctgacgagccgaacggcacccagccgctgatgtac
cagcagatcaccaagcagcgcaccacccgcgagctgtatgccgatcagctgatcagcgcc
ggccgtatcgacgccgagcgtgctcaggccaagatcgacgaataccgcaacgccctggac
aacggcctgcacgtggtgaaaagcctggtcaaggagccgaaccgcgagctgttcgtcgac
tggcgtccgtacctgggccacgcctggactgcgcgtcacgacacccgtttcgacctcaag
accctgcaggacctgtcggccaagctgcttgagctgccggaaggcttcgtggttcagcgt
caggtgtcgaagatctacgaagaccgtcagaagatgcaggccggtggcttgccgatcaac
tggggttatgcagagaccatggcctacgccaccctgcagttcgaaggtcacccgatccgc
atgaccggccaggacatcggccgtggcaccttctcgcaccgtcacgcggtgctgcacaac
cagaaggacgccagcacctacgtaccgctgcagaacctgttcccgggccagccgaagttc
gagctgtacgactccttcctgtcggaagaagcggtactggccttcgaatacggctactcg
accaccacgccgaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gcgcaagtggtgatcgaccagttcatcaccagcggcgagcacaagtggggccgcctgtgc
ggtctgaccatgctgctgccgcacggttatgaagggcagggcccggagcactcctccgcg
cgtctggagcgttacctgcagctgtgcgccgagcacaacatccaggtctgcgtaccgacc
accccggcacagatctaccacctgctgcgtcgccaggtcatccgtccgctgcgcaagccg
ctgatcgtcctgacgccaaagtcgctgctgcgccacaagctggccatctcgaccttggaa
gacctggcagaaggctcgttccagaccgtgatcccggaaatcgacaccctcgatccggcc
aaggtcgaacgcctgatcctgtgcagcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggccgcgaagacatcgccatcgtgcgtatcgagcagttgtatccgttccct
gaggacgacctgatcgaaatcctcgcgccttacaccaacctcaagcatgcagtgtggtgt
caggaagagccgatgaaccagggcgcctggtacagcagccagcaccacatgcgccgtatc
ctgggccgccacaacaaggcactggtcctggaatacgccggccgcgacgcttctgccgcg
ccagcctgtggttacgcttcgaagcacgccgaacagcaggaaaaactgctgcaagacgcc
ttcactgtctaa
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