Polaromonas sp. SP1: DT070_02930
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Entry
DT070_02930 CDS
T05689
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos00300
Lysine biosynthesis
pos00550
Peptidoglycan biosynthesis
pos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DT070_02930
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DT070_02930
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pos01011
]
DT070_02930
Enzymes [BR:
pos01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DT070_02930
Peptidoglycan biosynthesis and degradation proteins [BR:
pos01011
]
Precursor biosynthesis
Amino acid ligase
DT070_02930
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
NMT1
YqeC
LpxK
Motif
Other DBs
NCBI-ProteinID:
AYQ27075
LinkDB
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Position
complement(618485..619984)
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AA seq
499 aa
AA seq
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MSTQLHTPEQAAGWLRERVNGSLWTDSRKVAQGDGFIAWPGAATDGRKFVGAVLAAGAKA
CLVEQDGAADYGFDDEKVAAYAGLKAATGPIASAYFNEPSRQLRISAVTGTNGKTSTAWW
LAQALGRIGHKCGVVGTLGIGEPGAMVSNGLTTPDPVLLQQALRRFADEGFAACALEASS
IGVVEHRLDATAIEVAIFTNFTQDHLDYHASMDAYWEAKAALFGWPGLKAAVINIDDSKG
AELNASLEGRGLDLWTVSCAEPARLQAQAIEHGADALSFDVVEGSERHRVHAQVVGQYNV
SNLLGVLAALRAMGIALADAVGACTGLLPVPGRTETLAMPGLPLVVIDYAHTPDALEKVL
LALKPSAARRGGRLWCVFGCGGDRDATKRPLMAAVAEKAADQIVVTSDNPRGENPLAIIC
QVLLGLSHRDAVHVQADRAAAITHALSLAQPQDVVLLAGKGHESFQEISGQKLPFSDREH
AQAALDARAAAAGVQGGRS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacgcaactccacacccccgagcaggcagcgggctggttgcgcgaacgcgtgaac
ggcagcctctggaccgacagccgcaaagtggcgcagggcgacggcttcattgcctggccg
ggcgctgcgacggacggccgtaaatttgtgggcgccgtgctggccgccggcgccaaggcc
tgcctggtcgagcaggacggcgcggccgactacggattcgatgacgagaaagtggctgct
tacgcgggcctcaaggccgcaaccgggccgattgcctctgcctacttcaacgaaccgagc
cggcagttgcggatttccgccgtcaccggcaccaacggaaaaacctccacagcctggtgg
ctggcccaggccctgggccgcatcgggcacaagtgcggggtcgtgggaaccctgggcatc
ggcgaacccggtgccatggtgtccaacggcctgacgacgcctgacccggtgctgctgcag
caagcgctgcggcgcttcgccgacgaagggtttgccgcatgcgcccttgaagcgtcttcc
atcggtgtggtcgagcaccgcctggatgccaccgccattgaagtggcgattttcaccaac
ttcacccaggaccacctcgactaccacgcatcgatggatgcgtactgggaggccaaggct
gcgctcttcggctggccgggcctgaaggcggcggtcatcaatatcgacgacagcaaggga
gccgagctcaacgcctcactggaaggccgcgggctcgatctctggaccgtgtcgtgcgca
gagcccgcacgcctgcaggcgcaagcgattgagcatggcgccgatgcgctgagttttgat
gtggtcgagggcagcgagcgccaccgggtgcacgcgcaggtggtgggccagtacaacgtg
tcgaacctgctcggcgtcctggcggcgcttcgtgcgatgggcatcgccctggccgacgcc
gtgggcgcctgcactggtttgctgccggttccggggcgcaccgagacgctggccatgcca
ggcctgccgctggtggtcatcgactacgcgcacacgccggacgccctcgaaaaagtattg
ctggcgctcaagccctcggccgcgcgccggggcgggcggctctggtgtgtatttggctgc
ggcggtgaccgcgatgccaccaagcgcccgctgatggcggccgtcgctgaaaaagccgcg
gaccagattgtggtgaccagcgacaacccgcgcggcgaaaacccgctggccatcatctgc
caggtgttgctcggcttgagccaccgggatgccgtgcacgtgcaggctgaccgtgccgcc
gccatcacgcacgccttgagtttggcccaaccgcaagacgtggtgctgctggccggcaag
ggccatgaaagttttcaggagatcagcggccagaagctgccgttttccgaccgtgaacat
gcgcaggcggccctggatgcccgcgccgccgcggccggtgtgcaagggggccgctcatga
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