Polaromonas sp. SP1: DT070_15055
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Entry
DT070_15055 CDS
T05689
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DT070_15055 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pos03400
]
DT070_15055 (nth)
Enzymes [BR:
pos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DT070_15055 (nth)
DNA repair and recombination proteins [BR:
pos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DT070_15055 (nth)
Prokaryotic type
DT070_15055 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AYQ29226
LinkDB
All DBs
Position
complement(3162277..3162921)
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AA seq
214 aa
AA seq
DB search
MKKEAIAPFFATLKAANPMPVTELEYTSVFELLAAVLLSAQATDVSVNKATRKLYPVANT
PQAILDLGLEGLESYIRTIGLYRTKAKNLLATCEILVKQHGGQVPRTREALEALPGVGRK
TANVVLNSAFGEAVMAVDTHIFRVSNRTGLAPGKNPLEVELGLLKRVPTEYLVDAHHWLI
LHGRYVCIARKPLCWQCAVAPWCDFEPKTPMPAA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaagcgatcgccccattcttcgccacgctgaaagccgccaacccgatgccg
gtgacggagctggaatacaccagcgtgttcgagctgctggctgcggtgctgctcagcgcc
caggccaccgacgtgagcgtgaacaaggccacgcgcaagctctacccggtggccaatacg
ccacaggcgattcttgatttgggactggaagggctggagtcgtacatccgcaccatcggg
ctgtaccgcaccaaggccaaaaacctgctggccacctgcgagatcctggtgaagcagcat
ggcggccaggtgccgcgcacacgcgaggcgctggaggccctgcccggcgtgggccgcaag
acggccaatgtggtgctgaactcggcctttggcgaagcggtgatggcggtcgacacgcac
atctttcgcgtgagcaaccgcacgggtctggcgcccggcaaaaacccgctggaggttgag
ctgggcctgctcaagcgcgtgcccactgaatacctggtggacgcgcaccactggctgatc
ctgcacgggcgctatgtgtgcattgcacgcaagcccctgtgctggcagtgtgcggtggcg
ccctggtgcgactttgagcccaagacgccgatgccggcggcttga
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