Polaromonas sp. SP1: DT070_17150 Help Entry DT070_17150       CDS       T05689                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pos  Polaromonas sp. SP1 Pathway pos03030   DNA replication pos03410   Base excision repair pos03420   Nucleotide excision repair pos03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pos00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DT070_17150    03410 Base excision repair     DT070_17150    03420 Nucleotide excision repair     DT070_17150    03430 Mismatch repair     DT070_17150  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pos03032]     DT070_17150    03400 DNA repair and recombination proteins [BR:pos03400]     DT070_17150 Enzymes [BR:pos01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DT070_17150 DNA replication proteins [BR:pos03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DT070_17150 DNA repair and recombination proteins [BR:pos03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DT070_17150    NER (nucleotide excision repair)     GGR (global genome repair) factors      DT070_17150    MMR (mismatch excision repair)     DNA ligase      DT070_17150   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DT070_17150 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH BRCT_2 Zn_Ribbon_TF 5_3_exonuc Zn_ribbon_PADR1 DUF4796_N RUBY_RBDX Motif Other DBs NCBI-ProteinID:  AYQ29591 LinkDB All DBs Position complement(3619462..3621570) Genome browser AA seq 702 aa AA seqDB search MATKDLFAQPEPSPQPSSDAARVAALRAELHLHAHRYYVLDEPTIPDAEYDRLFKELQAL EAAHPELLTADSPTQRVGGKPLDQFASVRHKVPMLSIRTETDTEASGAQNFDTRVRKELG LAESDPPVEYVAELKFDGLAMSLRYENGILVQAATRGDGEVGEDVTQNIRTINQIPLRLP ADAPPVMEVRGEVYMRRADFEALNEKQREKIAQGAKGEKTFVNPRNAAAGGVRQLDPALA ARRRLSFFAYGLGDISPPEEGGPAFETHFQLLLKLRSWGFPVAAQTQLAQGAPELIAFHQ AIGKQRDSLPYDIDGVVYKVNSLALQKKMGFVTREPRWAVAHKYPAQEQLTTVQAIEVQV GRTGKLTPVAKLAPVFVGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVL LDKRVQDAPQFTMPRKCPVCGSDAVREEGEADYRCTGGLFCGAQRKEAILHYAHRRAVEV EGLGDKLVEQLVDANVIRTLPDLYKLGLTALASLDRMAEKSANNLLEALEKSKQTTLPRF LFGLGIRHVGEATAKELARHFGKLDAIMDATEEQLLEVSDVGPIVAQSIRTFFEQPHNRE VVEQLRACGVTWEEGEPAARAPQPLSGKTFVITGTLPTLSRDEAKDKVEAAGGKVAGSVS KKTDYVVAGEEAGSKLVKAQTLGIPVIDEAALLAMLAMLADS NT seq 2109 nt NT seq  +upstreamnt  +downstreamnt atggccaccaaagacctgtttgcgcagcctgaaccttcgccgcagccgagctccgacgcg gcgcgcgtcgctgctctgcgcgcggagctgcacctgcacgcgcaccgctattacgtgctc gacgagccgaccattcccgatgccgagtacgacaggctgttcaaggagttgcaggcgctg gaggcagcccaccccgaactgctgacagcggattcgccgacccagcgcgtgggcggcaag ccgctggaccagtttgcgagcgtgcgccacaaggtgcccatgctcagtatccggaccgaa accgataccgaagccagcggcgcgcaaaacttcgacacccgcgtgcgcaaggagctgggc ctggccgagtccgacccgccggtcgagtacgtggccgagctcaagttcgacggcctggcc atgagcttgcgctatgaaaacggcatcctggtgcaggccgccacgcgcggcgacggtgaa gtcggtgaggacgtgacgcagaacatccgcaccatcaaccagattccgcttcgactgcca gccgatgctccgccggtcatggaagtgcgcggtgaggtctacatgcgccgcgcggatttt gaagcgctgaacgaaaagcagcgcgagaagatcgcccaaggtgcgaaaggcgagaagacc ttcgtcaacccgcgcaacgcggcggccggcggtgtgcgccagctggatccggccctggcc gcgcggcggcgcctgagcttttttgcctacggcctgggggatatctcgccgccggaagag ggcggcccggcgtttgagacccatttccagttgctgctgaagctgcgttcatggggtttt ccggttgcagcccagacgcagcttgcacaaggcgctcctgaattgatagcatttcaccag gccatcggcaagcagcgcgacagcctgccttatgacattgatggcgtggtctacaaggtc aacagcctggcgctgcagaaaaagatgggctttgtgacgcgcgagccgcgctgggccgtg gcgcacaaatacccggcgcaggagcagctcaccacagtgcaggccattgaagtgcaggtc ggccgcaccggcaagctcacgcctgtagccaagctggcgccggtgtttgtgggcggcgtc accgtcaccaacgccacgctgcacaacgaagacgaagcccgccgcaaagacgtgcgggtc ggcgataccgtcatcgtgcgccgcgccggcgacgtgattcccgaagtggtcagcgtgctg ctggacaaacgtgtgcaggatgcgccgcagttcaccatgccgcgcaaatgcccggtctgc ggctcagatgccgtgcgcgaagagggcgaggccgattaccgctgcaccggaggcctgttt tgcggcgcccagcgcaaggaagccatcctgcattacgcgcaccggcgtgccgtggaggtc gaaggcctgggtgacaagctggtcgaacaattggtggatgccaatgtgatccgcaccttg cccgacctctacaagctgggcctcacggcgctggccagcctggaccgcatggcggaaaaa tcggccaacaacctgcttgaagcactcgaaaaatccaagcagacgacgctgccgcgcttc ctgttcggtctgggcatacgccatgtgggtgaagccaccgccaaagagctggcacgccac ttcggcaagctggacgccatcatggatgccaccgaggagcaattgctggaagtgagcgat gtcggccccatcgtggcccagagcatccgcaccttctttgagcagccgcacaaccgcgaa gtggtcgagcagttacgcgcctgcggcgtgacctgggaggagggcgagccggccgcacgc gccccgcagccgctttccggcaagacctttgtcatcaccggcacgctgccgaccttgagc cgcgacgaggccaaagacaaggtcgaggcggccggcggcaaggtggctggttctgtcagt aaaaaaaccgactacgtggtggctggcgaggaggccggcagcaagctggtcaaggcgcaa acgctgggcattcccgtgattgacgaagcggcgctgctggccatgctggccatgctggcc gatagttaa

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