Polaromonas sp. SP1: DT070_19845
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Entry
DT070_19845 CDS
T05689
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pos
Polaromonas sp. SP1
Pathway
pos01501
beta-Lactam resistance
pos01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DT070_19845
01503 Cationic antimicrobial peptide (CAMP) resistance
DT070_19845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pos03036
]
DT070_19845
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pos02000
]
DT070_19845
01504 Antimicrobial resistance genes [BR:
pos01504
]
DT070_19845
Chromosome and associated proteins [BR:
pos03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DT070_19845
Transporters [BR:
pos02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DT070_19845
Antimicrobial resistance genes [BR:
pos01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DT070_19845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
LPAM_2
Motif
Other DBs
NCBI-ProteinID:
AYQ30072
LinkDB
All DBs
Position
complement(4223518..4224780)
Genome browser
AA seq
420 aa
AA seq
DB search
MPKSRVVRSILSPQFTLHQPLVVVAALSLLLAGCGKGDAQGGGAPPPPQVGVVTVTQGDV
GLVTELPGRLEASRVAQVRARAAGILQKRLFREGSDVKEGQPLFTIDSAPYAAAAASAKA
GQARAEANLAQATALAERYKPLVEANAISKQEYANAVAAQKQAEADVAVGKANVQTASIN
LGYAAVTAPISGRIGRALVTEGALVGQGEATQLAVVQQINPMYVNFTQSATDVMKLRAAM
ESGQFKRASGADAASVRIVLEDGTEYAKPGRLLFSDLTVDATTGQVTLRAEVPNPGGQLL
PGLYVRVRLEQAQATNAITLPQQAVTRTNQGDSVMVVGADGKVSPRNIKIGSSQGNKWVV
LDGLKTGEQVIVDGFQKMQPGAPVKPVPWQPPGAAGAASAPAASASAAAPAASAASSAAK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtctcgcgttgtccgttcaattttgagcccccaatttacccttcaccagccg
cttgttgtggtcgcggcgctttcactgctcctcgccggttgcggcaagggtgacgcacag
ggcggcggcgcgccacccccgccgcaggtgggtgtggtgacggtcacccagggcgatgtc
ggattggtcaccgagttgccaggccgcctggaggcgtctcgtgtggcgcaggtcagggcg
cgcgccgccggtattttgcaaaaacggctgttccgcgaaggcagcgacgtgaaagagggg
cagccgcttttcaccatcgactccgcaccgtacgcggcagccgccgccagcgccaaggcg
ggccaggcgcgcgccgaagccaatctggcacaggccaccgctttggccgagcgctacaag
ccgctggtagaggccaacgccatcagcaagcaggagtacgctaacgccgtggctgcccag
aagcaggccgaagccgacgtggccgtgggcaaggcgaatgtgcagacggccagcatcaac
ctgggatatgccgcggtgacggcgcccatttcaggccgtatcggccgcgcgctggtgact
gaaggtgcactggtcggtcagggtgaagcgacccaactggcggtggtccagcagattaac
ccgatgtatgtcaacttcacgcagtccgccacggatgtgatgaagctccgtgccgcgatg
gaaagcggccagttcaagcgcgccagcggcgccgatgccgccagcgtacgcatcgtgctt
gaagacggcaccgaatacgccaaacccgggcgcctgctgttttccgacctgaccgtcgat
gcgacgaccgggcaggtgacgctgcgggccgaagtaccgaaccccggcggccagctgctg
ccaggcctctatgtgcgcgtgcgccttgagcaggcgcaagccaccaatgccattaccttg
ccccagcaggctgtgacgcgtaccaaccagggtgactccgtcatggtggtcggcgccgac
ggcaaagtcagcccgcgcaacatcaagatcggctcttcccaaggcaacaagtgggtcgtc
cttgacggcctcaaaaccggcgagcaggtcatcgtcgacggcttccagaagatgcagccc
ggcgctcctgtgaagcccgtgccgtggcaaccgcccggagccgcaggcgccgcctcggcc
ccggcggcgtccgcctcagccgccgcgcctgccgcgtccgccgcatcctcggcagcgaag
taa
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