Porphyrobacter sp. YT40: E2E27_06570
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Entry
E2E27_06570 CDS
T06153
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot01501
beta-Lactam resistance
pot01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E2E27_06570
01503 Cationic antimicrobial peptide (CAMP) resistance
E2E27_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pot03036
]
E2E27_06570
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pot02000
]
E2E27_06570
01504 Antimicrobial resistance genes [BR:
pot01504
]
E2E27_06570
Chromosome and associated proteins [BR:
pot03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E2E27_06570
Transporters [BR:
pot02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E2E27_06570
Antimicrobial resistance genes [BR:
pot01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E2E27_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
YknX_C
CzcB_C
Beta-barrel_RND_2
BSH_CusB
HH_CzcB
HH_EMRA
Biotin_lipoyl
VG27
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QDH34027
LinkDB
All DBs
Position
complement(1396727..1397893)
Genome browser
AA seq
388 aa
AA seq
DB search
MKRICTGIAACLLVVACSGEQAPPAPQPIPVQTVTIASQSIPNVIELPGRVEPVRQAEVR
ARVTGIVQKRLYTEGTNVSQGQPLFLIDPRELRASYAQTKAALDRARATERNARAVVERY
KPLVAENAISSQEYDAALATAREAEANVAQIRAQLEAANLQLNYTTVRAPIAGRAGRAEI
TEGALVSQTEGTLMTRIEQTAPVYVNFAQSASQVLAIRRAISAGEVVLDEDQRVEVRLTF
TDGTEYPIPGYINFLAFSVDEETGTVGLRAEFPNPTGLLLPGEFVRAKLFVGELKQGIVV
PQRAVTLSEQGGSVFVIDAKGLVAPRPVKLGALVDGNWIVESGLKAGDVVITSNLQKLRP
GVPVKPVDAASKAKPSAAPKPAPRSGAR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatctgcaccggcattgccgcctgcttactggtcgtcgcgtgttcaggtgaa
caggcaccgcccgccccgcagccaatcccggtgcagaccgtcaccatcgccagccagtcg
atccccaacgtcatcgagctgccgggccgggtcgagccggtgcgtcaggccgaggtgcgt
gcgcgggtcaccgggatcgtgcagaagcggctctacaccgaaggcaccaatgtttcgcag
ggccagccgctgttcctgatcgatccgcgcgagctgcgcgccagctacgcccagaccaag
gctgcactcgaccgcgcgcgggcgaccgagcgcaacgcgcgtgccgtggtggagcggtac
aagccgctggtcgcggaaaacgccatcagcagtcaggaatatgatgccgcgctggcaacc
gcgcgcgaggccgaggccaatgtcgcgcagatccgcgcgcagctggaagccgccaacctt
cagctcaattacaccaccgtgcgcgcgccgatcgcggggcgcgcagggcgggcagagatt
accgaaggcgcgctggtgagccagaccgagggcacgctgatgacccggatcgagcagacc
gcgccggtctatgtcaatttcgcccagtcggcgagccaggttctggcaatccgccgggcg
atcagcgcgggcgaagtggtgctcgatgaagatcagcgggtcgaagtccgcctcaccttc
actgacggcaccgaatatcccatccccggttacatcaacttcctcgccttttcggtcgac
gaggagaccgggacggtcggcctgcgcgccgaattccccaatcccaccgggctgctgctg
ccgggcgaattcgttcgcgccaagctcttcgtcggcgagctgaagcagggtattgtcgtc
ccgcagcgcgcggtaacgctgtccgaacagggcggctcggtcttcgtgatcgacgccaag
gggctggtggctccgcgcccggtgaagctcggcgcgctggtcgatggcaattggatcgtc
gaaagcggcctgaaggcgggcgatgtggtgattaccagcaacctccagaaattgcgccca
ggcgtgccggtgaaaccggtcgacgctgccagcaaggccaaaccctccgccgcgcccaaa
cctgccccacgcagcggggcgcgctga
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