Porphyrobacter sp. YT40: E2E27_09680
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Entry
E2E27_09680 CDS
T06153
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00020
Citrate cycle (TCA cycle)
pot00270
Cysteine and methionine metabolism
pot00620
Pyruvate metabolism
pot00630
Glyoxylate and dicarboxylate metabolism
pot00680
Methane metabolism
pot00710
Carbon fixation by Calvin cycle
pot00720
Other carbon fixation pathways
pot01100
Metabolic pathways
pot01110
Biosynthesis of secondary metabolites
pot01120
Microbial metabolism in diverse environments
pot01200
Carbon metabolism
Module
pot_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pot_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pot_M00012
Glyoxylate cycle
pot_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E2E27_09680 (mdh)
00620 Pyruvate metabolism
E2E27_09680 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
E2E27_09680 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
E2E27_09680 (mdh)
00720 Other carbon fixation pathways
E2E27_09680 (mdh)
00680 Methane metabolism
E2E27_09680 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
E2E27_09680 (mdh)
Enzymes [BR:
pot01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
E2E27_09680 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
ThiF
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QDH34572
LinkDB
All DBs
Position
complement(2070372..2071334)
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AA seq
320 aa
AA seq
DB search
MARKKIALVGAGNIGGTLAHLAALKGLGDIVLFDVAEGIPQGKALDLSQCGPVEGFDASI
TGSNDYADIAGADVVIVTAGVARKPGMSRDDLLGINLKVMKAVGEGIRDNCPDAFVICIT
NPLDAMVWALREFSGLPANKVVGMAGVLDSARFATFLAWEFGVSVKDVNAFVLGGHGDTM
VPVLSYSTINGIPVKDMAKIKGISEDRLGEIVQRTRSGGGEIVALLKTGSAFYAPATSAI
SMAEAYLYDQKRILPCAVEVNGQYGVDGLYVGVPVVIGAGGAEEVIEISLSDEEKANLQV
SVDAVKELLEACKALDSSLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaagatcgccctcgtcggcgcaggcaatatcggcggcacgctcgctcac
ctcgccgccctcaagggccttggcgacatcgtcctgttcgacgtggcagagggcattccg
cagggtaaggctttggacctctcgcagtgcggcccggtcgaaggcttcgacgcttcgatc
accggttcgaacgactatgccgatatcgcgggcgccgacgtggtgatcgtcaccgcgggc
gtcgcgcgcaagcccggcatgagccgcgacgatctgctcggcatcaacctcaaggtgatg
aaggcggtcggcgaaggtatccgtgacaactgccccgatgccttcgtgatctgcatcacc
aacccgctcgacgcgatggtgtgggcgctgcgcgaattctcgggcctccccgccaacaag
gtcgtcggcatggccggcgtgctggactcggcgcgtttcgccaccttcctcgcgtgggaa
ttcggcgtcagcgtcaaggacgtgaacgccttcgtgctcggcggccacggggatacgatg
gtgccggtgctcagctactcgacgatcaacggcatccccgtgaaggacatggccaagatc
aagggcatctccgaagaccgccttggcgaaatcgtccagcgcacccgctcgggcggcggc
gagatcgtggcgctgctcaagaccggctcggccttctacgcacccgccaccagcgccatt
tcgatggcagaagcctacctctacgaccagaagcgcatcctgccctgcgcggtcgaggtg
aacggccagtacggcgttgacgggctctacgtgggcgtgccggtggtgatcggcgcgggc
ggtgcggaagaggtgatcgagatcagcctctctgacgaagagaaggccaacctccaagtc
agcgtcgatgcggtcaaggaactgctcgaggcgtgcaaggcgctggatagctcgctggcc
taa
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integrated database retrieval system