Plecotus auritus (brown big-eared bat): 308234356
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Entry
308234356 CDS
T11911
Symbol
PCDH15, AC0HY7_001189
Name
(RefSeq) protocadherin-15
KO
K16500
protocadherin-15
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
308234356 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pots03037
]
308234356 (PCDH15)
04515 Cell adhesion molecules [BR:
pots04515
]
308234356 (PCDH15)
Cilium and associated proteins [BR:
pots03037
]
Primary cilia and associated proteins
USH complex and associated proteins
308234356 (PCDH15)
Cell adhesion molecules [BR:
pots04515
]
Cadherins
Protocadherins
308234356 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Ig_Cad99C_N
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_CELSR2_9th
CDH23_a-b
Motif
Other DBs
NCBI-GeneID:
308234356
NCBI-ProteinID:
XP_080498085
LinkDB
All DBs
Position
9:complement(<32076479..33342739)
Genome browser
AA seq
1769 aa
AA seq
DB search
MLQQFYLWKWLASGIILGSFFGICFGQYDDDWQYEDCKLARGGPPATIVAIDEESRNGTV
IVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPIKQMLFLNSTGRVLDRDPPMNIHSIV
VQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFAGDNG
ATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN
DRAQNLNERRTTTTTLTVDVLDGDDLGPMFIPCVLVPNTRDCRPLTFQAAIPELRTPEEL
NPIIVTPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNR
DFYQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGSTIS
DSVNLTTPLRIVVLDKDIEDTKDPELHLFLNDYTSVFTITPTGITRFLTLLQPVDREEQD
TYIFSMTAFDGVQESQPVVVNIRVLDANDNTPTFPEISYNVYVYTDMSPGDSVLQLTAVD
ADEGSNGEISYEILIGDQGDFIINKETGLITIAPGVELIVGRTYALTVQAADNAPPAERR
HSICTVYIEVLPPDNQSPPRFPQMMYSLEVSEAMRIGAVLLNLQATDREGDPITYAIENG
DPQRVFNLSETTGILTLGKALDRESTDRYILIVTAHDGRPDGTSTATVNIVVSDVNDNDP
VFDPYLPRNLSVVEEEANAFVGQVRATDPDAGINGQVYYSLGNFNHLFRITSNGSIYTTV
KLNREVRDYYELLVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAG
TTFLQVEATDVDLGANVSYRIRSPEVKHLFAMHPFTGELSLLRSLDYESFPDQEASITFL
VEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGIVAPDAVKGTPITSVYAEDADP
PGLPASRVRYRVDGVQSPYPASIFDVEEDSGTVITRVNLNEEPTTIFKLVVIAYDDGEPV
MSSSAVVKILVLHPGEIPRFTQEEYRPPPVSELAARGTAVGVISAAAVNQSIVYSIISGN
EEGKFGINNITGVIYVNDLLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQ
DENDHPPVFQKKFYIGGVSEDARMFDSVLRVKATDKDTGNYSAIAYRLIIPPIKEGKEGF
VVETYTGLIKTAMLFHNMRRSYFMFQVIATDNYGTGLSGKADVLVSVVNQLDMQVIVSNV
PPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYSKCDLTVYAIDP
QTNRAIDRKELFKFLDGKLLDINKDFQPHYGEGGRILEIRTPEAVTSIKKRGESLGYTEG
ALLALAFIIILCCIPAVLVVLVSYRQRQAECTKTARLQAAAAAMPPPKPAAPAPAPAAAP
PAPPPPGAHLYEEVGDSTMYEMPQYGSRRRLLPPAEQEEYGEVVGEAEEEEEEEQVKPTV
EIREPSEEEVVVTIEKPPAAEPTYTTWKRARIFPMIFKKVRGLAERRGIVHLEGEEWQRR
LEEEDKDYLKLTLDQDEATESTVESEEETSSDYTEHTETESEFSYSETTEEESESETPEE
EEESSTPESEESSTESEGEKARKNIFLARRRPVVEEVVEVKGKKQQPPEEPEELQVEEEE
APPAEGEESEPAATEEPTDLEPEEGSMESASVEGGVGSEEESESASTTSSSESQSGGPWG
FQVPEYDQSRSASQKKPPGANAEGYNTAL
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacagttttatctctggaaatggttagcttcggggatcatccttggttctttc
ttcggaatctgctttggccagtatgatgatgactggcaatatgaggattgcaaactagct
aggggaggaccaccagctaccatcgttgctattgatgaagagagtcggaatggtaccgtt
attgtggataacatgctgatcaaagggactgctggaggaccagacccgaccatagagctc
tctttaaaggacaacgtggattactgggtgctgctggatcccattaagcagatgctgttc
ctgaacagcacgggcagagttctggatagagatccaccaatgaacatacactccatcgtg
gtgcaagtccagtgcgtcaacaaaaaagtgggcactgttatctaccatgaagttcgaatc
gtggtgagagacaggaatgacaactcacccacgttcaagcatgaaagctactatgccact
gtgaatgagctcaccccagttggcaccacgatatttacaggatttgcaggagacaatgga
gctacagacatcgatgatggcccaaacggacagatagaatatgtgattcagtataatcca
gatgatccgacatccaatgacacctttgaaattcccctcatgttgactggaaatgtagtg
ttaaggaagaggctcaactatgaagataaaacacgctactatgtcatcattcaagctaat
gatcgtgcacaaaatctgaatgaacggcgaaccaccaccaccaccctcaccgtggatgtt
ctggatggagatgacttgggtccaatgtttattccttgtgtcctggtgccaaacactcgt
gattgccgtccactcacctttcaagctgccatacctgagctgaggactccggaagaactg
aaccctatcatcgttaccccacccatccaagccattgatcaggaccggaatattcagccg
ccatcagataggccgggcatcctctattccatccttgttgggactcctgaggattaccca
cgatttttccatatgcatcccaggactgcagaacttagtctcctggagccagtaaacaga
gacttttaccagaaatttgatttggttattaaggctgaacaggacaatggtcatcccctc
cctgcctttgccagtctacacatagaaatactggatgaaaacaatcagagcccatatttc
acgatgcccagttatcaaggctacatcctagaatctgcccccgtgggatcaactatttct
gacagtgtaaatttgaccacccctctaaggattgtggttctagacaaggacatagaagat
acgaaagacccagagcttcaccttttcctgaatgattacacctcagtgttcaccatcaca
ccgactggaatcacccgcttcctcaccttactgcagccagtggacagggaagaacaggac
acttacatcttctcgatgacggcctttgatggtgtgcaagaaagccagccagttgttgtc
aatattcgggtgctggatgcaaatgataacactccaaccttccctgaaatatcctataat
gtctacgtttatacagacatgagccctggggatagtgtcctacagctcactgcagtcgac
gcagacgaagggtcaaatggggagatctcctatgaaatcctgattggggatcagggagac
ttcatcatcaataaagaaacagggcttatcaccatcgctccaggggtggaattgatagtt
gggcggacctacgcactcacggtccaagccgcggataatgctcctcctgcagagagaagg
cactccatctgcaccgtgtacattgaagtgcttcctccagacaatcaaagccctccccgc
ttcccacagatgatgtatagcctagaagtcagtgaagccatgaggattggtgctgtttta
ttaaatctacaggcgactgatcgagagggagacccaataacatatgccattgagaatgga
gatcctcagcgagttttcaatctttcagaaactactgggattctaaccttagggaaagca
ctggacagggaaagcaccgatcgctacattctaatcgtcactgcacatgatggcaggcca
gatgggacctcaactgccacagtaaatatagtggtgtcagatgtcaatgacaatgatcca
gtgtttgatccctatctgcctagaaatctatctgtggtggaagaagaagccaatgccttt
gtgggtcaagtaagggcaactgaccccgatgctggaataaatggccaagtgtactacagt
ttgggtaacttcaatcatctttttcgtatcacatccaatgggagcatttacacaacagtg
aagcttaacagggaagtcagggactactatgaacttcttgttgtggcaactgatggagcg
gtacaccctcgtcattcaactctaacactggccatcaaggttttggatattgatgataac
agtcctgtgttcaccaattcaacgtatactgttgttgttgaagagaatctgcctgctggg
actaccttccttcaagtagaggccacagatgttgaccttggagcaaatgtatcttatcgg
ataagaagcccagaagtgaagcacctttttgcaatgcatccatttacaggagaactctcc
cttttaaggagtttggactatgagtcatttccagaccaggaagcaagtatcactttccta
gtagaggcctttgatatttacggaacaatgcctcctggtattgctactgtcacggtgata
gtaaaggatatgaatgattaccctccagtgtttagtaaacgcatctacaaagggatcgtg
gctccagatgctgtcaagggtacaccgatcacaagcgtttatgctgaagatgcagaccct
cctggattacctgcaagtcgtgtgaggtatagagtagatggtgtccagtctccttatcct
gccagtatttttgatgtagaagaagattctggaacagtaataactcgagtcaatcttaat
gaagaacctacgaccatttttaagttggtggttattgcgtatgatgatggtgagcctgtg
atgtccagcagtgccgtagtgaaaatccttgtcttacatcccggagaaatcccacgtttc
acacaagaggaatacaggcctcctccagtaagtgaacttgctgccagagggactgcggtg
ggtgtaatttctgctgcggcggtcaatcagagtattgtgtactccattatttcaggaaat
gaagagggtaagtttggaattaataacatcacgggtgttatctatgtgaatgaccttctg
gactatgaaacaaggacaagctatgtacttcgagtccaagctgattccctggaagtggtc
ctcgccaatctccgagttccttcaaaaagcaatacagctaaggtatatattgagattcag
gatgaaaatgatcatcccccagtgtttcagaaaaaattctacattggaggtgtatctgaa
gatgcaaggatgtttgattctgtgctcagagttaaggctactgataaagatactggcaat
tatagtgccatagcatacagactcataattccaccaattaaagaaggaaaagaaggattc
gtggtggaaacatatacagggcttatcaaaacggccatgctcttccataacatgaggagg
tcctacttcatgtttcaagtcatcgcaactgacaactatgggacgggactaagtggcaaa
gcagatgtacttgtctctgttgtcaatcagctggacatgcaagtcattgtttctaatgtg
cccccgactctggtggaaaaaaagatagaagaccttacagagattttggatcgctatgtt
caggagcaaattcctggtgccaaagttgtggtggagtccattggtgctcgccggcatgga
gatgccttttctctagaagattatagcaagtgtgacttgaccgtctatgcaatcgaccct
caaaccaatagagccatcgacagaaaagagctttttaaattcttggatggcaaactgctc
gatatcaataaagactttcaaccgcattatggggaaggaggacgcattctggagatccgg
actccagaggcagtgaccagcattaagaagcgaggagaaagtctgggctacacagaaggg
gccttgctagctctggccttcatcattattctctgctgtatccctgccgtcttggtggtt
ttggtcagctacagacaacgccaagctgaatgcaccaagacagcacgcctgcaagctgct
gctgccgcgatgccccctcccaagccagcagctcctgcccctgccccagcggccgcccct
ccagcaccgccacctccgggtgcacatctctatgaagaagttggggacagcacaatgtat
gaaatgcctcaatatggaagtcgccgtcgcttgttaccaccggctgaacaagaggaatat
ggtgaggtggttggtgaagctgaggaggaagaagaggaagagcaagttaaacccacagtt
gaaattagagagcctagtgaggaggaagtagttgtcactattgaaaagccaccagcagct
gagccgacgtacacaacgtggaagagagccaggatattcccaatgatttttaagaaagtt
agagggctagcagagagaagaggcatcgttcaccttgaaggtgaagagtggcagagacgc
cttgaggaagaagacaaagattatttgaaactaactctggaccaagatgaagctacagaa
agcacagtagaatccgaggaggaaacctcaagcgactatactgaacacactgaaacagaa
tccgagttcagttattctgagacgacagaagaggagtcggagtcggagacacctgaggag
gaggaggaaagttctacccctgaatcagaagagtcatccacagagtcagaaggagaaaag
gcaaggaaaaacatatttctcgcaagaagaaggcccgttgttgaagaagtcgtggaagtc
aaaggtaaaaaacagcagccacctgaagaaccagaagaactgcaggtagaagaagaagaa
gcacccccggcagaaggagaggagagtgagccggctgccacagaagaaccaactgacctt
gaacctgaggagggcagcatggagtcagcttcggtggaaggaggtgtgggaagtgaggag
gaatcagaatcagccagcactaccagtagtagcgaaagtcagtctggaggcccctggggc
tttcaggtgccagagtatgaccaaagcaggagcgcaagccaaaagaagcctccgggagcc
aacgctgagggttacaacacagccctttag
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integrated database retrieval system
