Plecotus auritus (brown big-eared bat): 308248089
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Entry
308248089 CDS
T11911
Symbol
C9orf72, AC0HY7_014922
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform 1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots04140
Autophagy - animal
pots05014
Amyotrophic lateral sclerosis
pots05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
308248089 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308248089 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
308248089 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pots04131
]
308248089 (C9orf72)
Membrane trafficking [BR:
pots04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
308248089 (C9orf72)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
308248089
NCBI-ProteinID:
XP_080524201
LinkDB
All DBs
Position
5:115901861..115924091
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AA seq
481 aa
AA seq
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MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIAETVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVKTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPSTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTVIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLFLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRSFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgtcctcccccatctccagctgttgccaagacagagattgctttaagt
ggtgaatcacctttattagctgctacctttgcttactgggacaatattcttggtcctaga
gtgagacacatttgggctccaaagacagaacaggtacttctcagcgatggagaaataact
tttcttgccaaccacaccctaaatggagaaatccttcgaaatgcagagagtggggctata
gatgtaaagttttttgtcttgtctgaaaagggagtaatcattgtttcattaatcttcgat
ggaaactggaatggggataggagcacatatggactatcaattatacttccacagacagaa
cttagcttctacctcccgcttcacagagtgtgtgtcgatagattaacacacattatccgg
aaaggaaggatatggatgcataaggaaaggcaagagaatgtccagaagatagtgctagaa
ggcacagagagaatggaagatcagggtcagagtattattccaatgcttactggagaagta
attcctgtaatggaactgctttcatctatgaaatcacacagtgttcctgaagaaatagat
attgctgaaacagttctcaacgatgatgacattggtgatagttgtcatgaaggctttctg
ctcaatgccattagctcacacctgcaaacctgtggctgttctgttgtagtaggtagcagt
gcagagaaagtaaataagatagtaaaaacattatgcctttttctgactccagcagagaga
aaatgctctagattatgtgaagcagaatcatcatttaaatatgagtcaggactctttgtc
caaggcctgctaaaggattccactggaagctttgtgctacccttccggcaagtaatgtat
gctccctaccccagcactcacatagacgtggatgtcaacactgtcaagcagatgccgccc
tgtcacgagcacatctacaatcagcgcaggtacatgcgctcagagctgacggcattctgg
agagccacttcagaggaggacatggctcaggataccgtcatctacaccgacgaaagcttc
actcccgatttgaatatttttcaagatgtcctacatagagacacgctagtaaaagccttc
ctggatcaggtctttcatttgaagcctggtttatctctcaggagcactttccttgcacag
tttctgctcttccttcacagaaaagctttgacgctaataaaatatatagaagatgatacg
cagaaggggaaaaagccctttaaatctcttcggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctagctgagaaaattaaaccaggcctgcac
tcctttatctttggaagatctttctatactagtgtacaagaacgagacgttctaatgact
ttttaa
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