Plecotus auritus (brown big-eared bat): 308252991
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Entry
308252991 CDS
T11911
Symbol
SCN4A, AC0HY7_019824
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform 1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pots Plecotus auritus (brown big-eared bat)
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pots04040
]
308252991 (SCN4A)
Ion channels [BR:
pots04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
308252991 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
EMC3_TMCO1
Motif
Other DBs
NCBI-GeneID:
308252991
NCBI-ProteinID:
XP_080534116
LinkDB
All DBs
Position
7:<19952126..19983241
Genome browser
AA seq
1849 aa
AA seq
DB search
MARLSLSTVVPVGPHSLRPFTQESLAAIEQRIVEEAARQQRNKELEIEEPERKPRGDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYLLSPFNII
RRGAIKVLIHSYPAERGKRRGGERQRRGMFIMITILTNCVFMTMSDPPPWSKNVEYTFTG
IYTFESFIKMLSRGFCIDDFTFLRDPWNWLDFSVIMMAYVTEFVDLGNISALRTFRVLRA
LKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPP
FNDTNSTWYDNEMWSGNDTWGSNDTWYGNDTWHSPESGASNSTFDWDAYINDEGNFYFLE
GALDALLCGNSSDAGRCPEGYTCIKAGRNPNYGYTSYDTFSWAFLSLFRLMTQDYWENLF
QLTLRAAGKTYMLFFVVIIFLGSFYLINLILAVVAMAYAEQNEANMAEDLEREEEFQQLL
EKYKKHQEEMEKAKAAQALEDGEADGDPAHGKDCNGSLDTSPGEKGPPRPSCSADSAISD
AMEELEEAHQKCPPWWYKCAHKVLIWNCCAPWMKFKNIIHLIVMDPFVDLGITICIVLNT
LFMAMEHYPMTDEFDHVLTVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNVFDSIIVTL
SLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKSYKECVCKIASDCSLPRWHMHDFFHSFLIIFRILCGEWIETMWDCMEV
AGQAMCLTVFLMVMVIGNLVVLNLFLALLLSSFSADSLAAPDEDGEMNNLQIAIGRIKWG
ISFAKAFLLGLLHGKILSPKEIMLHLGRPGEAGEAGEAGEAGESAPEDEKKEPPPKEGDK
DLKDNHILNHVGLADGPTPSIELDHLNFINNPYLTIHVPIASEESDLEMPTEEETDTFSE
AEDVKKLPQSLDRNSSVCSTVDYKPPEENAEEQVEENPEGEQPEECFTEACVQRCPCLYV
DISQGRGKTWWTLRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRPTIRTILEY
ADKVFTYIFILEMLLKWVAYGFKVYFTNAWCWLDFLIVGVSIISLVANWLGYSELGPIKS
LRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFY
YCMNTTTSERFDISEVNNKSECESLMYTGEVRWLNVKVNYDNVGLGYLSLLQVATFKGWM
DIMYAAVDSREQGEQPQYEVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKMRK
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGVVYDFVTKQVFDIVIMILICLNMV
TMMVETDDQSQLKVNILYNINMIFIIIFTGECVLKMFALRHYYFTVGWNIFDFVVVILSI
AGLALSELIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLL
LFLVMFIYSIFGMSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNS
GPPDCDPTLENPGSSVKGDCGNPSVGICFFCSYIIISFLIVVNMYIAIILENFNVATEES
SEPLCEDDFEMFYETWEKFDPDATQFIEYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPM
VPGDKIHCLDILFALTKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLRRKHEE
VCAIKIQRAYRRHLLQRSVKQASYMYRHSQDGSGDGAPEKEGLIVNTMSKLYGHENGDSN
VQGKGEETGSTGDAGPAMGLTPISPSDAVLPPSPPPGQTVRPGVKESLV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcctgtctctgtccaccgtggtgcctgtgggcccccacagcctgcgccccttc
acccaggagtccctggcagccatagaacagcggatagtggaggaggcggcccggcagcag
cggaacaaggagctggagatcgaggagcctgagcggaagccacgaggcgacctggaggct
ggcaagaacctgccccttatctatggggaccccccgccagaggtcatcggcatccccttg
gaggacctggacccttactacagtgacaagaagaccttcattgtgctcaacaagggcaag
tccatcttccgcttctccgccacacccgccctctacctgctgagccccttcaacatcatc
agacgcggcgccatcaaggtgctcatccactcatatcctgctgagaggggcaagcgcagg
ggtggggagaggcagaggcgaggcatgttcatcatgatcaccatcttgaccaattgcgtg
ttcatgaccatgagtgatccgcctccctggtccaagaacgtggagtacaccttcacaggg
atctacacctttgaatccttcatcaagatgctgtcccgaggcttctgcatcgacgacttc
acattcctccgggacccctggaactggctggacttcagcgtcatcatgatggcgtacgtg
acggagtttgtggacttgggcaacatctcggccctgagaaccttccgggtgctgcgggcc
ctgaaaaccatcaccgtcatcccaggtctgaagacgattgtgggggccctgatccagtcg
gtgaaaaagctctcggatgtgatgatcctcaccgtcttctgcctgagcgtcttcgccctg
gtggggctgcagctcttcatgggaaatctgcggcagaagtgtgtgcggtggcccccaccc
ttcaacgacaccaacagcacgtggtacgacaatgagatgtggtccggcaacgacacctgg
ggcagcaacgacacctggtacggcaacgacacctggcacagcccggagagcggggccagc
aactctacctttgactgggatgcctacatcaatgacgaagggaacttctatttcctggag
ggtgcccttgacgccctgctctgtgggaacagcagtgacgctgggcgctgccccgagggt
tacacgtgcataaaggctgggcggaaccccaactatggctacaccagctatgacaccttc
agctgggccttcctgtctctcttccgcctcatgacacaggactattgggagaacctcttc
cagctgaccctccgagcagctggcaagacctacatgctcttcttcgtggtcatcatcttc
ctgggctccttttacctcatcaacctgatcctggcggtggtggccatggcctacgccgag
cagaacgaagccaatatggctgaggatctggagagggaagaggagtttcagcagttgctg
gagaaatacaaaaagcatcaggaggaaatggagaaggccaaggctgcccaggctctggaa
gatggggaggcagatggtgacccagcccatggcaaagactgcaatggcagcctggacaca
tcaccaggggagaaggggcccccaaggccgagctgcagcgcagacagcgccatctcagat
gctatggaagagctggaagaggcccaccagaagtgcccaccatggtggtacaagtgtgcc
cacaaagtgctcatatggaactgctgcgccccatggatgaagttcaagaacatcatccac
ctgatcgtcatggaccccttcgtggatctgggcatcaccatctgcatcgtgctcaacacc
ctcttcatggccatggagcattaccccatgacagatgaatttgaccatgtgctcaccgtg
ggcaacctggtcttcacgggcatcttcacagcagagatggtgctgaagctcatcgccttg
gacccctacgagtacttccagcagggctggaacgtcttcgacagcatcatcgtcacgctc
agcctggtggagctgggcctggccaacgtgcaggggctgtcggtgctccgctccttccgt
ctgctgcgggtcttcaagctggccaagtcgtggcccacgctgaacatgctcatcaagatc
atcggcaactcagtgggggcgctgggcaacctgacgctggtgctggccatcatcgtgttc
atcttcgccgtggtgggcatgcagctgtttggcaagagctacaaggagtgcgtgtgcaag
atcgcctcggactgcagcctgccccgctggcacatgcacgacttcttccactccttcctc
atcatcttccgcatcctgtgcggcgagtggatcgagaccatgtgggactgcatggaggtg
gccggccaggccatgtgcctcaccgtcttcctcatggtcatggtcatcggcaacctagtg
gtcctgaacctcttcctggccctgctgctgagctcctttagcgccgacagcctggcagcc
ccggacgaggacggcgagatgaacaacctgcagatcgccatcgggcgcatcaagtggggc
atcagcttcgccaaagccttcctgctggggctgctgcacggcaagatcctgagccccaag
gagatcatgctccacctcgggaggcccggggaggccggggaggctggggaggccggggag
gccggggagagtgcccccgaggacgagaagaaggaaccgccgcccaaggagggtgacaag
gacctgaaggacaatcacatcctgaaccacgtgggcctggctgacggaccaacccccagc
attgagctggaccacctcaacttcatcaacaacccctacctgaccatccacgtgcccatc
gcctccgaggagtccgacctggagatgccgacagaggaggagactgacaccttctcggag
gctgaggatgtcaagaagctgccacagtccctggacaggaactcctccgtctgcagcaca
gtggactacaagccccccgaggagaatgctgaggaacaggtggaggagaaccccgagggg
gagcagcctgaggagtgcttcactgaggcctgtgtgcagcgctgtccctgcctctacgtg
gacatctcccagggccgtgggaagacgtggtggaccctccgcagggcctgcttcaagatc
gtcgagcacaactggtttgagaccttcattgtcttcatgatcttgctcagcagtggcgcc
ctggccttcgaggacatctacattgagcagcggcccaccatccgcaccatcctggagtat
gccgacaaggtcttcacctacatcttcatcctggagatgctgctcaagtgggtggcctac
ggcttcaaggtgtacttcaccaacgcctggtgctggctcgacttcctcatcgtgggcgtc
tccatcatcagcctggtggccaactggctgggctactcggagctgggacccatcaaatcc
ctgcggacgctgcgggccctgcgccccctgagggcactgtcccgattcgagggcatgagg
gtggtggtgaatgccctcctgggagccatcccctctatcatgaacgtgctgctcgtctgc
ctcatcttttggctcatcttcagcatcatgggcgtcaacctgtttgccggcaagttctac
tactgcatgaataccaccacctctgagaggttcgacatctccgaggtcaacaacaagtct
gaatgcgagagcctgatgtacacaggagaggtccgctggctcaacgtcaaggtcaactac
gacaacgtgggtctgggctacctctccctcctgcaggtggccaccttcaaaggctggatg
gacatcatgtatgcagccgtggactcccgggagcaaggggagcagccgcagtacgaggtg
aacatctacatgtacctctattttgtcatcttcatcatcttcggatccttcttcaccctc
aacctcttcatcggcgtcatcattgacaacttcaaccagcagaagaagaagatgaggaaa
gacatcttcatgacggaggaacagaagaaatactataacgccatgaagaagcttggctcc
aagaaacctcagaagccaattccaaggccccagaacaagatccagggcgtggtgtacgac
tttgtgacgaagcaggtcttcgacatcgtgatcatgatcctcatctgcctcaacatggtc
accatgatggtggagacggatgaccagagccagctgaaggtgaacatcctgtacaacatc
aacatgatcttcatcatcatcttcacgggggagtgtgtgctcaaaatgttcgccctgcgc
cattactacttcaccgtcggctggaacatcttcgacttcgtggttgtcatcctgtccatt
gcaggtcttgcactctctgagctgatccaaaaatacttcgtgtcccccacactgttccgt
gtgatccgcctggcccggattgggcgtgtcctacgactgatccgtggggccaagggcatc
cggacactgctctttgccctcatgatgtcgctgcctgccctcttcaacatcggcctcctc
ctcttcctggtcatgtttatctactccatctttggcatgtccaacttcgcctacgtcaaa
aaggagtcaggcatcgatgacatgttcaactttgagacctttggcaatagcatcatctgc
ctctttgagatcaccacgtcagctggctgggacgggctcctcaaccctatcctcaacagc
gggccccccgactgtgaccccaccctggagaatccgggcagcagcgtcaagggtgactgt
ggcaacccctccgtcggcatctgcttcttctgcagctacatcatcatctccttcctcatc
gtggtcaacatgtacatcgccatcatcctggagaacttcaacgtggccaccgaggagagc
agcgagcccctctgtgaggacgactttgagatgttctacgagacgtgggagaagtttgac
cccgacgccacacagttcatcgagtacagccgcctctccgacttcgtggacaccttgcag
gagccgctgaggattgccaagcccaacaagatcaagctcatcacactggacctgcccatg
gtgccaggcgacaaaatccactgcctggacattctcttcgccctgaccaaagaggtcctg
ggagactcaggggaaatggacgccctcaaggagaccatggaggagaagttcatggcagcc
aacccctccaaggtctcctatgagcccatcaccaccaccctcaggaggaagcacgaggag
gtatgtgccatcaagattcagagggcctaccgccggcacctgcttcagcgctcggtgaag
caggcgtcctacatgtaccgccacagccaggacggtagcggggacggggcccccgagaag
gaggggctgatcgtcaacaccatgagcaagttgtacggccacgagaacggggacagcaat
gtgcagggcaagggtgaggagacgggctccacaggggacgctggacctgccatggggctc
acgcccatcagcccctccgacgctgtcctccctccctccccacccccagggcaaacagta
cgcccaggggtcaaagagtctctggtctag
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integrated database retrieval system
