KEGG   Plecotus auritus (brown big-eared bat): 308257628
Entry
308257628         CDS       T11911                                 
Symbol
SMNDC1, AC0HY7_024461
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform 1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pots  Plecotus auritus (brown big-eared bat)
Pathway
pots03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pots00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    308257628 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pots03041]
    308257628 (SMNDC1)
Spliceosome [BR:pots03041]
 Complex A
  U2 snRNP components
   U2 related factors
    308257628 (SMNDC1)
 Complex B
    308257628 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    308257628 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 308257628
NCBI-ProteinID: XP_080543818
LinkDB
Position
9:13160900..13172083
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDCFASAQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGSKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaaacagctggcaagctacaaagctcagctccagcaagttgaa
gctgccctgtctggaaatggagaaaatgaagatttgctaaaattaaaaaaagatttacaa
gaagttatagaactaaccaaagaccttctgtcaactcaaccttcagaaactcttgcaagt
tcagactgttttgcttctgctcagcccactcattcatggaaagtaggggacaaatgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagaa
aacggcaccgctgcaatcacctttgctggctatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcagcaaacccatg
tccaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgagcaggagagagaggaccagaaagtgaaatggcaacag
ttcaacaacagggcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcacctgagagtgtaactggcaaagttggagtaggaacttgtggaattgctgataaacct
atgacacagtatcaagatacctctaaatacaatgtcaggcatttgatgcctcaataa

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