Penicillium oxalicum: POX_a00092
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Entry
POX_a00092 CDS
T09521
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pou
Penicillium oxalicum
Pathway
pou03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
POX_a00092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pou03400
]
POX_a00092
Enzymes [BR:
pou01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
POX_a00092
DNA repair and recombination proteins [BR:
pou03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
POX_a00092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
74432446
NCBI-ProteinID:
XP_049972809
LinkDB
All DBs
Position
I:271930..275167
Genome browser
AA seq
1062 aa
AA seq
DB search
MGFKFTSLCDLLSQLEENRVVKATTVKPEAPDIQTVAQWFHAHERRLHHPETDALAFLSC
LFPEGRPDRVYGLQAASLARIIGRCLGLGSSRLSELNRWRTPGGPDLGQCVENVLRQAEN
PLHSGKAISTEEINQTLDQIASRCRFSAPRARRQQGAVDIESALSPLYQRLSSRDAKWLT
RMILKNYAPITLPENFTLSQFHVLLPHLLQFQNNFESALHTLSLEPMNKFPPRPDRFLIP
QLCSAVLEHLQPRIGYKIGRPEYYKARSTKHCYDLIKGRRMSLERKYDGEYCQIHVDLTN
KQSPYQIFSKSGKDSSADRAAIIPTLTRCLNVGAVDCKFKTSCILEGELVVWDEELGGIA
DFHKLRKHLPRSGTFLGIESDSPPQPYEHLMVIFFDILLLDDNICLRAPHHQRRLLLQDV
VQSIHGHAAIAEQEVVDFNRTESRSQLENSFARAIAQRWEGLILKASDEPYFSIHAAGMN
DRFGRWIKLKKDYIPGLGDTVDLLLVGASYNAQDAAALTFLQGLQWTHFLVGCLFNKDAV
VQRGARPHFRVVDVVDRHGMHWKTLQLLNQLGQFQARDPETFDDFHIEMGRASLPVASVI
FQMPFIVEMLGSGFEKPSGARYFSLRFPRILKLHDDRSMMDAASFRELQILAEDARAVPV
DELSQEQHHWRKRLKVGNGLNQYIVQRSRTPSTASVSSTESAVPEISDTTMSAHEAGLQS
VLAKDFARKASAVNPNQNPTMDRKVQTHLTREEEGHLSHKAGQTKRHRRVLSKNQNLSNC
RTGKQDLPEHACEINGFVSKSQVRDLGVQPHVASAKAVGAQHKDHAAVGKDAMEDTQRQD
LTISVNHTPVESVIQPNASPLTTIPVYLSGQSSETGNLSDRQDSSNLSQFLEALLSEETR
LLFKISNPRAASQEAVFGIALVNRKVLPLGQLIHKVAKALVQLVSNKVPSQPNKGRIFFL
DASFLAEDVCPDDLRFCLRNTWRELAPRFFYACLYWTVNGQDSSVHESGQADDVLSSSRE
VPQGPKNKHLVSFYVSFDLVEILALGEHTSPNGSSDPHYPDI
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggattcaaattcacgtccctctgtgacttgctgtcacagttggaggagaatcgggta
gttaaagctaccactgtgaagccagaggcaccagatatccagaccgtcgctcaatggttc
cacgctcatgaaagacgacttcatcacccagagaccgatgccttagcctttttgtcgtgt
ctttttccggaggggcgcccagaccgagtctatgggctacaagctgcctctctggcacgc
atcattggtcgatgcttagggctgggctcgtcgagactctcggagctgaatcgttggcgc
acgcccggggggccagatcttggacaatgtgtcgagaatgtgctccgtcaggcagagaat
ccgctgcattcagggaaagccatctcgaccgaggaaatcaatcaaactctggaccagatc
gcatctcgatgccgtttctcggccccccgagctcgtcgccagcagggagctgttgacata
gaaagtgctctatcacctctctaccaaaggctgagcagtcgtgatgcgaaatggctcaca
aggatgattctgaagaactacgcacccattaccctacccgagaattttacgctttcacag
ttccacgtcttacttccacatctgctgcaatttcagaacaactttgagagcgccctgcac
acgctctctttggaacccatgaataagtttcctccgcgtcctgatcgcttcttgattcct
cagctatgctccgctgttcttgagcatttacagccccgaattgggtacaaaattggtcga
ccggagtattacaaagccaggagcaccaaacattgttacgatttgatcaaaggtcgtcgc
atgagcctggagcgaaaatatgacggagaatattgccagatccacgtcgacctcaccaac
aaacagagtccctaccaaatcttttctaaaagtggcaaggactcttctgctgacagagct
gcgatcattccaacattaacgcgttgtctgaatgtcggtgcagtggactgcaaattcaag
accagctgcattctcgagggagaattggtagtgtgggatgaggagcttggtggaattgca
gattttcacaagcttcgaaagcatctgcctcgatctggcacattcctcggaattgaaagc
gattccccgccccagccatatgagcacctgatggtgatatttttcgacatccttttactc
gacgacaacatctgcctcagggctcctcatcatcaaagacgcttactcttgcaggatgta
gttcaaagtattcatggacacgccgctattgccgaacaagaagttgttgacttcaatcgg
actgagagccggtcgcagctggagaatagctttgccagagcaattgcacagagatgggaa
ggacttattctgaaggcttctgatgagccctacttctcaatccacgcagctggaatgaat
gaccgatttggtcgctggatcaaactcaagaaagactacataccaggcttgggtgacacc
gttgacctgctattagttggcgcgagctacaatgctcaagatgcggcagctctcacattt
ctacaaggtttacaatggacgcacttcctggtcggatgtctttttaacaaagacgcagta
gtgcagcgtggagcccggcctcactttcgtgtagtcgatgttgttgaccgtcacggcatg
cactggaagacactgcagttgctaaatcagttgggacagtttcaagctcgagatccagag
acattcgatgattttcacattgaaatgggccgagcaagcctgccggtggcgtcggtcatc
tttcagatgccgttcattgttgaaatgttggggagtggatttgagaagccatctggcgcc
cgctatttcagtctccgattccccaggatcttgaaacttcatgatgaccgatcaatgatg
gatgctgcctcattcagagagctacaaattctggcagaagatgctcgtgctgtccccgtc
gatgaactctcgcaagaacagcatcactggcgcaagcgactgaaagttgggaacgggtta
aaccaatacatcgtgcagagatcacgtaccccttccacagccagtgtctccagtactgaa
tccgctgtgcctgaaatttctgacactaccatgagtgcccatgaggcaggccttcaatcc
gtgctggctaaagactttgctagaaaggcttccgctgtcaacccaaatcagaatccgaca
atggatcgtaaagtgcagactcacctgactcgtgaggaagaaggtcacttgtctcacaag
gctggccagacaaagcgtcacaggcgggttttatccaaaaatcagaatttatcaaactgc
agaacgggcaaacaggatcttccagagcatgcctgtgagatcaacgggttcgtatcgaag
tcacaagttcgtgaccttggcgtgcagcctcacgtagcgagtgcgaaagcagttggcgct
caacacaaggaccatgctgccgtgggcaaagatgctatggaagatactcagagacaggat
ctcactatttctgttaatcacaccccagttgagtctgtcatacagccgaatgcgtccccg
ctcacgacaattcccgtgtacttgtctggacaatccagcgagaccggaaacctctctgat
cggcaagactcttcaaatctttcgcaatttctagaagctcttctctctgaggaaacgaga
ttacttttcaaaatttccaacccacgagctgcctctcaggaggccgtcttcggcatagcg
ttggtcaaccgaaaagtcttacctcttggtcagcttattcataaagttgcaaaagctcta
gtacaacttgtctccaacaaagtcccgtctcagcccaacaagggccgaatattctttttg
gacgcttcttttctggcagaagacgtttgtccggatgacttgcgattttgccttcggaat
acatggcgggagctcgccccaagatttttctatgcttgtctctattggacagtcaatggc
caagactcgagcgtgcatgaatccggtcaggcggatgatgtccttagttcttctcgagaa
gttcctcaaggtcccaagaacaagcatttggtgtccttctatgtcagcttcgatttagtt
gagattctcgctttgggcgaacacacttcgccaaacggctcgtctgatccacattacccg
gatatttga
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