Penicillium oxalicum: POX_c04417
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Entry
POX_c04417 CDS
T09521
Name
(RefSeq) U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pou
Penicillium oxalicum
Pathway
pou03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POX_c04417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pou03041
]
POX_c04417
Spliceosome [BR:
pou03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
POX_c04417
Complex C
U5 SnRNP specific factors
POX_c04417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Ras
Motif
Other DBs
NCBI-GeneID:
74436702
NCBI-ProteinID:
XP_049970853
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All DBs
Position
III:2841641..2844840
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AA seq
984 aa
AA seq
DB search
MDDLYDEFGNYIGEAESDEEQQDQVPQAFKFDEAFDDDEEEEEEVNDQQLMEVDEGPSNA
VILHEDKQYYPSAQQVYGADVETMVQEEDAQPLSEPIIAPVQKKKFAIAETELPPVYFSR
EFMSDLLNFPDQIRNVALVGHLHHGKTAFMDMLVRQTHDLSARLEKRQGKRKEEQLRYTD
VHFLERERGVSIKAAPMSLVLQGTKGKSHLVNIIDTPGHVNFVDEVAASIRLVDGVILVV
DVVEGVQANTEQIVRHAVLEDLPLTLVVNKMDRLILELKLPPNDAYFKLKHVIEEVNTLI
ESIVPGQGERRRLSPEKGNVAFASSSMNWCFTLESFARMYADTYPKLDSAEFAARLWGDI
FYNPRSRKFTRKGVEENSKRAFVKFILEPIYKLYSHTISESPEDLKRTLASVGVFLKPSQ
LKTDAAELLRLVCDQFFGPPTGFVDMLVQHIPSPVEGSRRMLERYYTGPTDTKVAASMSA
CDQDGPLVVHVTKLFNTVDASGFNSFGRIMSGTARPGQQVRVLGEGYTPEDEEDMVIATI
SETWIAETCYNISTDGVPAGNWVLLGGVDNSIVKTATLVPLKLEDDEEPYIFRPIRHMTE
SVFKVAVEPVNPSELPKMLDGLRKVNKSYPLIATKVEESGEHIVLGTGELYMDCVLHDLR
RLYSEMEIKVSDPVTRFCETVVETSAIMCYSITPNKKNKITMIAEPLDEGIAEDIESGKV
SIKDPIRKVARYFEDNYDWDKLAARSIWAFGPEEMGPNILQDDTLPSQVDKKLLGTVRDS
ITQGFSWGTREGPLCEEPIRNTKFRLTDVSLADQAIYRGGGQIIPTARRAVYSSFLMASP
RLMEPIYSCTMTGPADAVASVYTVLSRRRGHVLSDGPIAGTPLYSVRGLIPVIDSFGFET
DLRIHTQGQAMVSLVFDKWSVVPGDPLDRDVKLKPLEVASAMATARDFVLKTRRRKGLAE
DVTVSKFLEPELWKGLQESGVLDS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctctacgatgagttcggcaattacatcggcgaagccgagtccgatgaggag
cagcaggaccaggttccccaggccttcaaatttgacgaggcctttgatgatgatgaagag
gaggaggaggaagtaaatgatcagcaattgatggaggtagacgagggtccctcgaatgcg
gtcattttacacgaagacaagcaatactaccccagcgcacaacaagtatacggcgccgat
gtcgagactatggttcaagaggaagatgcgcagccgctgtccgagccgatcatcgcgcct
gttcaaaagaagaaatttgcgattgcagaaacggagcttcccccagtctatttttcccga
gagttcatgtcagatttgctcaatttcccggaccaaatacgaaatgttgccctggtgggt
catttgcaccacggcaagacagccttcatggacatgctggtgcgacaaacacatgacctt
tctgcaagattagagaaacgccagggcaagcgcaaggaggagcagctccggtatacggac
gttcatttcctggaacgggagagaggcgtgtccatcaaagcagcgccaatgagcttggtg
ctccaaggaaccaagggcaaatcccacctggtcaatatcatcgatacccccggccatgtg
aactttgtggatgaggtagctgcgtcgatccgcctagtggatggtgtcattctcgtggtg
gacgtggtggagggtgtgcaggcgaacactgagcaaattgttcgacacgcggttctggaa
gatctccctttgactttggtggtgaacaagatggaccgtcttattctggaactgaagctt
ccccccaacgacgcctacttcaagctgaaacatgtcattgaagaagtcaacactctcatt
gagagtattgtgcctggccaaggcgaacgacgacgactgagccccgagaagggtaacgtc
gcatttgcatctagttctatgaactggtgctttacattggaatcctttgcgcgcatgtat
gcggacacctacccgaaattagattccgctgaatttgctgctcgcctctggggtgatatc
ttctacaatcctcggagtcggaagttcactcgcaagggtgtggaggagaactcaaaacga
gcctttgtgaaattcatcctagagcctatctacaagctctattcgcacaccatcagtgag
agcccggaggatctgaagcgcacgctggcgagcgtaggcgtcttcctgaagccatcgcaa
ctgaagaccgatgccgctgaactgctaagactggtgtgtgatcaatttttcggaccccct
actggattcgtggatatgctcgtgcaacatattccctctcccgtggaaggctctcggcga
atgttggaacgatattacaccggtcccacagacaccaaggttgcggcatccatgtccgcg
tgcgatcaggatggacctttggtcgtgcacgtgacaaagctcttcaatactgtcgatgct
agcggcttcaattctttcggtcgtatcatgagcggtaccgctcgacctgggcagcaagtc
cgagtcttgggagaaggctacactcccgaagacgaggaggacatggtgattgccaccatc
tccgagacctggatcgccgagacgtgctacaacatctccacagacggcgtgcctgcaggt
aactgggttctcctgggcggtgtcgacaactccatcgtgaagacggcaacgcttgtcccc
ttgaaactcgaggatgatgaagaaccatacattttccgtcctattcgtcatatgaccgaa
tccgtcttcaaggtcgctgtggagcctgtgaacccctccgaacttcccaagatgctggat
gggttaagaaaagttaacaagagttatcctctgatcgccacaaaggtggaagagtccgga
gagcacatcgtattgggaacgggtgaactctacatggactgcgtgctccatgaccttcga
cgactgtattcggagatggagatcaaggtgtccgacccggtgacgcgtttctgtgagacg
gtggtcgagacgtcggctatcatgtgttactctatcacacccaacaagaaaaacaagatt
accatgatcgccgagccactcgacgagggtattgctgaggatatcgagagcgggaaagtc
agtatcaaggatccgattcgcaaggtagcgcgttactttgaggacaattacgattgggac
aagcttgcggcccgcagcatatgggcgtttggtccggaggagatggggcccaacatccta
caagatgacacattgccttcgcaggtggataagaagctccttgggactgtgcgggactcg
atcacccagggtttcagctggggtacgagagaaggtcccctatgtgaagaacctatccga
aacaccaaattcagactcacggatgtgtcactggcggatcaagccatttatcgtggcggc
ggtcaaatcattccgactgcccgtcgagccgtgtattcctcgttcctgatggcctccccc
cggctcatggagcccatctattcatgcacaatgaccggtcccgccgacgcggttgcctcg
gtatacaccgtcctctcccggcgccgtggtcacgtcctgtcggacgggcccatcgccggt
acgccgctctactccgttcggggactcatccccgtgatcgactcatttggtttcgagacc
gatttacgaattcacacacaaggtcaggccatggtgagtcttgtgtttgacaagtggagc
gtcgttcctggggatccgttggatcgggacgtcaagctgaagcctctggaggtggcgagt
gccatggccactgcacgagactttgtgttgaagacccgccggcgcaagggtctggcggag
gacgtgacggtcagtaagtttttggaaccggaattgtggaaggggttgcaggaaagcggc
gttttggattcatga
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