Penicillium oxalicum: POX_c04480
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Entry
POX_c04480 CDS
T09521
Name
(RefSeq) ABC transporter domain-containing protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pou
Penicillium oxalicum
Pathway
pou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POX_c04480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pou03019
]
POX_c04480
Messenger RNA biogenesis [BR:
pou03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
POX_c04480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_25
AAA_15
PduV-EutP
AAA_23
AAA_16
RsgA_GTPase
ORC-CDC6-like
DUF3584
AAA_28
AAA_22
AAA
Roc
Arf
AAA_14
DLIC
FANCF
AAA_13
Motif
Other DBs
NCBI-GeneID:
74436760
NCBI-ProteinID:
XP_049970911
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Position
III:complement(3110985..3111892)
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AA seq
279 aa
AA seq
DB search
MTTPTPSIAVKDLSYKFQDGSDGLEHVSLDLPAGSRTLLIGANGAGKTTLLRLLSGKKLA
PTNTITVGGLDPFKDSLEGVTYLGVEWVLNSIVRTDIDVPTLLASVGGNHWPERRDELVD
ILDIDLSWRMHAVSDGERRRVQLAMGLLRPWTVLLLDEITVDLDLLSRSNFLAFLKRETE
SRACTIVYATHILDNLAQWPTHLVHMHLGKVKAWGSVETFYGQVPDWTSENSRLGELVLK
WLKEDLKARGPRNDGSSSQAKTYGAMNQIGGYGLEKRAE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcccaccccgtccattgcggtcaaggacctttcgtacaagttccaggacggt
tccgatggtcttgagcacgtcagtcttgatctgcctgcgggtagccgaacgctcctgatc
ggtgccaacggggccggtaagaccaccctcctgcgtcttctgtccggcaagaaactcgcc
ccgacaaacaccattaccgtcggtggactcgatccttttaaagacagtctcgagggcgtc
acctacctcggcgtcgaatgggtgctcaacagcatcgtccgcaccgacattgacgtgccc
actcttctcgcctcggtgggaggtaaccactggcctgagcgtcgcgatgaactcgtcgat
attctcgacattgacctttcctggcgcatgcacgccgtctctgacggtgaaaggcgccgc
gtccaactcgccatgggcctcctccgaccctggacggtgcttctgctggatgaaattacc
gttgacctggacttgctttcccggagcaacttcctagcctttttgaagcgggagactgag
tctcgggcctgtacgattgtctatgccacacatatcctggataacctggcacagtggcct
acgcatctcgtgcatatgcatctgggcaaagtgaaggcgtggggctccgtggaaaccttt
tatggccaggttccggattggacgtcggagaatagtcgactgggtgaattggtgctgaag
tggctgaaggaggatctcaaggcgcgaggacctcgaaacgatggctcctcgagtcaggcc
aagacgtatggagcgatgaatcagattggcgggtatggactggagaagcgagctgagtag
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