Paralichthys olivaceus (Japanese flounder): 109626731
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Entry
109626731 CDS
T06037
Name
(RefSeq) protocadherin-15-like
KO
K16500
protocadherin-15
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109626731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pov03037
]
109626731
04515 Cell adhesion molecules [BR:
pov04515
]
109626731
Cilium and associated proteins [BR:
pov03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109626731
Cell adhesion molecules [BR:
pov04515
]
Cadherins
Protocadherins
109626731
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
ECD
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_CELSR2_9th
CDH23_a-b
Fibulin_C
Cadherin_2
RibLong
Cadherin_4
TagA
Motif
Other DBs
NCBI-GeneID:
109626731
NCBI-ProteinID:
XP_019938424
LinkDB
All DBs
Position
Unknown
AA seq
1656 aa
AA seq
DB search
MVRTRLMGPLSWGRVKWPSAMGTGVFYLLLLSTCLGQDTEDWQYEECKLSRSGPPATIVA
IDEESPNGTLLVENMQINGVAEGPDRTISLSLRDNHDYWVILDPSKQALYLNSTGRLLDR
DPPSYIQSIVVQVQCTNELIGTVILHEVRIVVRDRNDNAPRFQQPRYYVAVSELTPVGTT
IFSGFWGNNGAADIDDGPNGQIEYTIQYNPKDPTANRTFDIPLTLFGSVVLRERLNYEEI
TRYLVIIQANDRAPYPSERRTATTTLTVDVLDGDDLGPMFLPCTLVGNTRDCSPITYKTN
VLELTEPNKVNPLNVTPPIQAVDQDRNIQPPSERPGILYSILIEQNNGHPLPAFANLQIE
VLDENNQAPYFLETSYHGYVSEASPVGTTIATSVSLSAPLAIIALDNDVEETRDPQLLFS
LDSYSNVFSVSATGIRRYLTLLQPLDRETQDFYTFTLLASDGVQQSFPVTVTITVLDAND
NTPTFANVSYNVNLFTDMMPGETVLQLSAVDSDSGPNGLVTYRILAGAQEHFIIGNSTGL
ISVAPGVDLAVGRSYALTVEAVDNGPAPQRRSSITTVYIEVLPPNNQSPPRFPLQQYNLE
ISEAMRTGATLLNLQAVDRERDTITYQIHSGDPHGHFALKENSGYLVLDKPLDRESLDYY
TLVVTASDGQPDGTSTAMVNIMVMDVNDNDPLFDSSLPVNLTVTEEQDNAFVGQVKATDP
DLGASGEVHYRLINHQKLFSINATGAIRTTVPLDREVKGHYFLIVEACDGAVDPRRSRLT
LSVTVLDVDDNSPVFTQQTYNVNLPENSPKDSVILQLKGTPAGLVRYKVDQEAYPYSASI
FDVDEHTGHVVTRVNLNEEPNLMFSLVVVAYDDGEPSKENTTLVEITVLQPSVIPVFTQE
EYRFPPVSEEADVGTPVGVIVAAAVNQTIVYSIIEGNEGGVFALNETTGVISTAKPLDYE
ANSSYVLKVEADSMRVVSSNLRAPSKTNTAKVVIDIQDENDHPPVFTTSLYIGGVAEDAK
TFTSVLQVQALDQDTGNYSAMIYRLIIPPQPGKDTKDSKDGFVIEPYSGVVKTAIMYRNM
RRSYFKFEVVATDNYGQGHSSKAEIVVSVVNQLDMQVVVSNVPPTYVEKNKNKLLSILER
YVQDQIPGAKVVVETIGPHRHGDGMEQEDYTKSDLMIYAIDPLTNRAVSRQELYKFLDGK
LLDINKEFQPFLPPGGRILEIRTPEVVTSVKKAMQTVGYTEGALLALAVIIILCCVPAIL
IVIITYRQFKERQAECAKTARIQMALPTGKPGGGTANNLYEELGDNAMRGYGQQEQTQQL
LRPSLLRPEELSMESGIDPGQDYYTQDYYNYDHGYDLPQYGSRRKLISPSGLYDEYGEVV
VDDDGSYYYSPQESDAEHGCRKHRIKLVTDREYETSSTGEDSLPETQRSRLSSTVNSHAN
VNGSIYMAQNGSIIRTRRSGNATVPMHPHATTNNNLKVASPIFSSRLAKHFKKLDKMAAT
LEERVPLNNPRTAADSGCNTLRTFQSSGVAASATATSSLSNTDNNKTLNVFITRQSSVSL
GSTSTSNTGPESVASKSNLLKAAQGDAQQQQHQSTAEGDELREGERESRVDGGSEDDDDG
LVMREPLECPSDRTQSDEEELWMGPWNNLHIPMTKL
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggttagaacgcgcttaatggggccactgtcatgggggcgggtcaaatggccaagtgca
atgggaacgggtgtcttttatctgctgctgctatcaacctgccttggccaagacacagaa
gattggcaatatgaggaatgtaaactgtctcggtcgggtcctcctgccaccatcgttgcc
atagatgaagagagccccaacggaaccttgttggtggagaacatgcagataaatggcgtg
gccgagggtccggatcgtaccatctctctttccctaagggacaaccacgactactgggtg
attctcgacccttccaagcaagccctttatctcaacagcactggacgccttctggataga
gatcccccctcatatattcagtccatcgtggttcaggttcaatgtaccaacgagctgatc
ggcaccgtgattttacacgaggtccgcatcgtcgttcgagaccgcaacgacaatgctccg
cgattccagcagccgagatactacgtggctgtgagcgagttgacaccagttggaaccacg
atcttctctggtttctgggggaacaacggggcagcggacatcgacgacggccccaacgga
cagatagagtatacgatccagtacaacccaaaagacccgacagccaacaggaccttcgac
atcccgctgacactgtttggctctgtggtcctaagagaaagactcaactacgaggagata
acacggtacctggtcatcatacaggctaacgaccgggccccctaccctagcgagcgccgc
acggccaccaccactctgacagtggatgtgctggatggtgacgacttgggtcccatgttt
ctgccctgcacgctcgtgggaaacacccgtgactgcagtcccatcacgtacaagactaac
gtgctggagctgacagagccgaataaggtgaatcctctcaacgtgactccaccaattcaa
gctgtggaccaagacagaaacatccaacctccgtccgaaagaccaggaatcttatactcc
atcctcattgaacagaacaatggccaccccctgccagcgtttgccaacctccaaatcgaa
gttctggatgaaaacaaccaggcaccctacttcctggaaacaagttaccatggctacgtc
agtgaagcatcgccagtgggaaccaccatagcgaccagtgtcagcctgtccgcaccactg
gccatcatagctctggataatgatgtggaggagaccagggaccctcagctcctgttctca
ttggacagctactccaacgttttctctgtgtctgcaactggaatcagaagatatctcaca
ctgctgcagccactggacagagagacacaagacttctatacattcacgctgttagcgtcg
gacggtgtccagcagagttttccggttaccgtgacgataacagtgttggacgcaaatgac
aacactccgactttcgctaacgtctcttataatgtcaacctctttactgatatgatgcct
ggagaaacggtgttacagctgtccgcagtagattctgattcaggtcccaatggtctagtc
acctaccggatcttagctggagcccaggagcacttcattattggaaacagcactgggctc
attagtgtggcaccgggtgttgatctcgctgtggggcggagctacgcgttgactgtagag
gccgtggacaacgggcctgcacctcagagaaggtcgtccattaccaccgtctatatcgaa
gttttgcccccaaacaaccagagccctccgcgtttccccctgcagcagtacaacctggag
atcagcgaagccatgaggacgggagcgacgctgcttaatctgcaggcagtggatcgggag
agggacactatcacttaccaaatccatagtggagacccccatggacactttgcactaaag
gagaattcagggtatttggttctggacaagcctctggacagggagtctctggattattac
accctggtggtcacagcctcagacggacagccagatgggacgtccacagcgatggtgaac
attatggtcatggatgttaatgacaatgacccactgttcgattcttcactgccagtgaac
ctcacagtcacagaggagcaggataatgcctttgtcggacaagttaaggctacggaccca
gatctgggcgccagcggtgaggtccactatcggctcatcaaccaccagaagctgttttcc
atcaacgccaccggagccatcagaaccacggtgccgctggacagggaggtgaaaggtcac
tactttctgatcgttgaagcctgtgacggtgcagtggacccccggcgatccaggttaact
ctgtccgtcactgttctggacgttgacgacaacagcccggtgttcacccaacaaacctac
aatgtcaaccttccagagaacagccccaaagactcagtcatattacagttaaagggcacc
cccgcaggtctagtgcgatataaagtggaccaggaagcgtatccatactctgccagtata
tttgatgtggatgaacacacaggacatgtggtcaccagagtgaacctcaatgaggagccc
aacctgatgttcagtctggtggtggtggcctacgatgatggcgagccttcgaaggagaat
acaaccctggtggagatcacagtccttcagccgtccgtcattcctgtgttcacccaagaa
gaatacaggtttccaccagtgagcgaggaggctgatgttggaaccccggtgggagtcatt
gtggcagctgctgtcaatcaaaccatcgtgtactccatcattgaaggcaacgagggaggt
gtgttcgcattaaacgaaacaacgggagtgatttccactgccaagcctctggactacgag
gcaaattccagctacgttctaaaggtagaggccgactccatgagggtggtgtcctcaaac
ctccgagctccgtcgaagactaacacagcgaaggtggtgatcgacatccaggatgaaaac
gaccacccaccagttttcaccacctctctttatatcgggggcgttgcagaagatgccaaa
accttcacctcagtcttgcaagtgcaggctctggaccaagacaccggtaactacagcgca
atgatttaccggctgatcatcccacctcagcctggtaaagacaccaaagacagcaaagac
ggctttgtcatcgagccgtacagcggcgtagtgaagacggcaatcatgtaccgcaacatg
aggaggtcgtattttaagtttgaggtggtcgctacggacaactatggacaaggacacagc
agcaaggcagagatagtggtgtcagtcgtgaaccagctggacatgcaggtggtcgtatca
aacgtccctccaacctacgtggagaaaaacaagaacaagctactcagcattttggaacgc
tacgtccaggatcagataccaggagcaaaggttgtcgtggaaaccatcgggccccatcgc
catggtgatggaatggagcaggaggactacaccaagtcagaccttatgatttatgccatc
gaccctctgacaaatagagccgtatccagacaggagctctacaagtttctcgacggtaaa
ctcttggacatcaacaaagagttccagcccttcctccctccaggcggacggattctggag
atccgaaccccggaggtggtgaccagcgtaaagaaagctatgcaaaccgtaggctacaca
gagggggcgctgttggctctggcagtgattatcatcctctgttgtgtccctgcaatctta
atcgttatcatcacctacagacaattcaaagaacgccaggcagagtgtgccaagacagcc
cgaatccagatggcactgccaacaggcaaacctggaggaggcactgccaacaacctgtac
gaggagctgggtgacaacgccatgcgtggatatggacaacaggagcagacacaacaactt
ctgcgaccttctctgctcagacctgaggagttatcaatggaatctggcatcgaccccggc
caggactactacacacaggattattacaactatgatcatgggtacgacctgcctcagtac
ggcagtcgcaggaagctgatctccccctccggcctctacgatgaatatggagaagttgtc
gtggacgatgatggcagctactactacagcccgcaggagtctgacgcagagcatggctgt
agaaaacatcggatcaagttggtgacggatcgagagtacgagaccagctccactggcgag
gacagtctgcctgaaacccaacgcagccgcttatcctcgaccgtcaacagccacgctaac
gttaacggcagcatctacatggcccagaacggctccatcatccgcacccggcgttcagga
aacgccacagttcccatgcacccgcacgccaccacgaacaacaacctcaaagtcgcctcc
ccaatcttcagctcacggctagccaagcactttaaaaaactagacaaaatggccgccacg
ttggaggagagagtacctctgaacaaccccagaacagcagcagacagcgggtgcaacacg
ctgcgcaccttccaaagctcgggggtggccgcgtcggcaacggccacttcctctttgtct
aacactgacaacaataaaacgctgaacgtgttcatcactcgacaatccagcgtttctctg
gggtcgaccagcaccagcaacacgggccctgaaagcgtagcgtctaagtccaacctgctc
aaagcggcgcagggcgacgctcagcagcagcagcatcagagcacagcggagggagacgag
ttgagagaaggcgagagagagtcgagagtagacggcggtagcgaagacgacgacgacgga
ctcgttatgagggagccgctggagtgcccgagcgacagaacgcagtcggatgaggaggaa
ctgtggatgggcccgtggaacaaccttcacatacccatgaccaaactctga
DBGET
integrated database retrieval system
