Paralichthys olivaceus (Japanese flounder): 109626832
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Entry
109626832 CDS
T06037
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109626832 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109626832 (kdm2a)
04121 Ubiquitin system [BR:
pov04121
]
109626832 (kdm2a)
03036 Chromosome and associated proteins [BR:
pov03036
]
109626832 (kdm2a)
Enzymes [BR:
pov01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
109626832 (kdm2a)
Transcription factors [BR:
pov03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
109626832 (kdm2a)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109626832 (kdm2a)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109626832 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
109626832 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
LRR_6
Cupin_8
Cupin_1
C1_1
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
109626832
NCBI-ProteinID:
XP_019938582
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYQDDGISDDEIEGKRMFDLDEKLQCDRFRSDLVKHMEGKDF
TFEYIQREGLREPIIFKTAEGLGLQMPDPDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRIQLNQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVMERYHYCLTNISHLTPEFQKYSLGKG
LTRADLQTNNHTGNGTSNGVDSETENAEITVKQEEEEDEDKEEDGAAQLTTPQHLLTPFE
LEGLCNLLGKLEELPVHKKCVPAGIQNAAALLEDMRAVLKEHSNDNPKLAYTGEPIVKWP
KRPSWYEPSTPPPTVLYRPRLAPNLHKPLGQRPTKRCSISALRRRRVRCKRCAGCCRKEC
GNCQYCHDMRKFGGPGRMKKGCITRQCLTPALPNTARCAICREGELDESDPSTYSLMECS
VCSQIAHRQCIKEPGEGKINDDLPSCWECPKCYQGKGSASESSSDEESGESESSSSLPPS
KLAYREGIGVSDGMRQVGRTGPQSRPTAPPPSQKLLLQHQQNRKRASALELRLKKKIKLE
RSKLLVKQSALDRSPRLLSSRLLSRLRSPTSRLSQGKGRGSNWSSGSLYHGSTGRTGSFL
QQQTSRSLVLESKGEPRRGRGRGVRLRGGGAGRGSGGGRDHGDLEEESEDSSSSSSTTSS
GSSSDEEEERGQNSGRGGDKENQPQSRVGRAAKEEEEGSEVANQNCAEDEDEEEMEQDSQ
TVDKDGSYHKVTLQRPTRTKRDPSAIVPKLEAIAPQAATSTLHNQTRPLVRPPIRNRSPC
PDQYSNRHTPPHTRSGHTDSRTSHSERLEVSKRQRPNRPAKLSNGASCSSSSEVTHLRIP
LSALQEGGSETDRESGLSGPGCEREVWVSVFRYLSRADLCICMAVSKNWYKWCLDKRLWA
RIDLSIKRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNWLVGRLPGLKDLMVAGCSWSS
ISALCSSGCPLLRSLDLRYADGVKDSQIRDLVSPPGCDNRSQLRTMQCLRLAGLDITDST
LRLVIRHMPHLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLTELNLGGCSKLTDTCLKYL
RRLSCISLLDLRGCKGVSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcatacacggtacagcaaacgcctgcgtacaggtacacggcgccgctac
caggacgatggaatctcagatgacgaaattgaagggaaacgaatgtttgacctggatgaa
aagttgcagtgcgacaggtttcgctcagatttggtcaaacacatggaaggcaaagatttc
acatttgaatacatccagagggaagggctcagggaaccaatcatctttaagacagctgaa
ggtcttggactacaaatgccagaccctgatttcagtgtgagtgatgtcaagttgtttgta
ggtagtcgacgtatcgtagatgtgatggacgtgaacacccagaagggaatcgagatgtca
atggctcagtggcgacgctactatgagacgccaccatcagaaagagaaaaactctacaat
gttatcagcctggagttcagccacaccaggctggagaatctggtcaaacgaccagcttcg
gtggaccttattgactgggtggacaacatgtggccccgtcatctgaaggagagacaaaga
gactccacaaacgccatcatagacatgcactatcccaaagtacagaagtattgtctcatg
agtgtgcagggctgcttcacagatttccacattgactttggaggcacttcagtctggtac
cacatcctgcgaggaggaaaggtgttctggctgattccacccacaccacagaacctggag
atgtatgagaactgggttttatcaggaaaacagggagacatcttcttgggggacaagtgt
catgactgtcagaggatacaactcaaccagggcaacaccttcatcatcccatcagggtgg
atccatgctgtgtacacgccagaggacacgttggtgtttggggggaatttcctccacagc
tttaatatcccgatgcagctcaacatctacagcattgaggatcgcacacgggtgccagca
aagttccgataccctttctactatgagatgtgctggtatgtcatggagagataccattac
tgtctgaccaacatctcccacctcacacctgagttccaaaaatactcccttggcaaagga
ctgacacgggctgaccttcaaaccaacaatcatactgggaatggcacctccaatggagtt
gacagtgaaactgaaaatgcagagatcacagtcaaacaagaagaagaagaagatgaagac
aaagaagaagatggagcagctcaacttaccacacctcagcatttgttgaccccctttgag
ctggagggactgtgcaacctcttggggaagctggaggagctgccagtccacaaaaagtgt
gtccctgcaggcatccagaatgctgcagccctgctcgaggacatgagggctgttctgaag
gagcattcaaatgataaccccaagctggcctacactggagagcccattgtcaagtggccc
aaaagaccatcatggtacgagccctccactcctcctcctactgtcctttaccgtcctcgc
ttggccccaaacctccacaagcctctgggtcagcggcccaccaaacgctgctccatctct
gccctgaggcgaagacgggtgaggtgcaagcgctgtgccggctgctgcagaaaggagtgc
ggcaactgccagtactgccacgacatgaggaagtttggtgggcctggacgcatgaagaag
ggctgcatcacgagacagtgtctaacgcctgcgttgccaaacacagctcggtgtgccata
tgtagagaaggtgaattagatgagtcggatccgagcacttactcactcatggagtgctcc
gtctgctcgcagattgctcatcgtcagtgcattaaggaacctggtgagggaaagatcaat
gacgatttacccagttgctgggaatgtcccaaatgttatcaaggcaaaggttcagcatca
gagtcttccagcgatgaggagagtggggagtcagagagctcatcctcgttgccaccttcc
aaacttgcataccgggaaggcattggtgtcagcgatgggatgagacaagtgggacgtacc
ggaccacaatctcgacccacagcaccaccaccttctcagaaactcttactgcagcatcaa
cagaatcgcaaaagagctagtgcactggagcttagacttaagaagaagataaaactggag
cgtagcaaactcttagtgaaacagtcagctctagatcgttctcctaggctgctgagttcc
agactgctgtccaggctgcgctctccaaccagcagactatctcagggcaaaggtcgggga
tccaactggtcgagtggctccctttaccacggctctacaggaaggaccgggtccttcctg
cagcagcagacttcccgcagtctggtacttgagtcgaaaggagagccccgcagagggagg
ggaagaggggtgaggctgcggggaggaggagcaggaagaggttccggaggtggtagagat
catggagacttggaggaggagagtgaggacagcagcagcagcagcagcaccaccagcagt
ggcagcagcagcgacgaagaagaggagcggggccagaacagtgggaggggaggggacaaa
gagaaccagccgcagtcgagagtaggacgagcagccaaagaagaagaagaagggagcgag
gtggccaaccaaaactgtgcagaggatgaagatgaagaggagatggagcaggacagtcaa
acagtggacaaagatggctcatatcataaagtgacactccaaaggccaaccaggaccaag
cgggacccatcagccattgtccccaagttggaggctatcgcacctcaagctgctacttcc
acattacacaaccagactagacccctcgtcagacccccaattagaaatcgcagcccctgt
ccggatcaatactccaataggcacacacccccacacactcgtagtggacacacagactct
cgcacctcccactcagagaggctggaggtctctaaaagacagaggccaaacaggccagct
aaactgagcaatggtgcttcctgttcttcatcctcagaggtaacccatctccgaatccct
ctgtccgccctgcaagagggagggagtgagacagaccgggagagtggtcttagtgggccg
ggatgtgagagggaagtgtgggtgtctgtcttccgctacttaagtcgagcagatctctgc
atctgcatggctgtcagcaagaactggtacaaatggtgtttagacaagcggctctgggcg
cggattgacctgagcatcaagcgcactgttactcctcaggccctaacaggcatcataaag
agacagcctgtgacactcgatctgtcatggaccaacatctctaaaaagcagctcaactgg
cttgttggccgcctgcctgggcttaaggatctgatggtggcaggttgttcctggtcgtct
atatcagctctctgctcctctggctgccctctcctccgttctctggacctgcggtacgca
gacggggtcaaagactctcagatcagggatcttgtcagccctccaggctgcgacaatcgc
agtcagttgcggaccatgcagtgtttacgactggcaggcctggacatcactgactccact
ctgcgcctggtgattcgccacatgccccatttaacaaaactggacctctcccactgcaac
agcctcactgaccactccatcaacctgctcacagcagtgggctcatccacccggaacacg
ctgacagaactcaaccttggaggctgcagtaaactgacagacacgtgtctaaagtatctc
cgccgcctctcttgcatctcactgcttgatctgcgaggctgcaaaggtgtctcccgcaag
gcctgtgaggccttcatctccgagctgtcagtcaacacgctctactgcctatcagatgaa
aaactgatccagaggatatcctaa
DBGET
integrated database retrieval system
