KEGG   Paralichthys olivaceus (Japanese flounder): 109628339
Entry
109628339         CDS       T06037                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03008  Ribosome biogenesis in eukaryotes
pov03013  Nucleocytoplasmic transport
pov03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109628339 (ran)
   03008 Ribosome biogenesis in eukaryotes
    109628339 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109628339 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pov03019]
    109628339 (ran)
   03009 Ribosome biogenesis [BR:pov03009]
    109628339 (ran)
   03016 Transfer RNA biogenesis [BR:pov03016]
    109628339 (ran)
   03036 Chromosome and associated proteins [BR:pov03036]
    109628339 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pov04147]
    109628339 (ran)
   04031 GTP-binding proteins [BR:pov04031]
    109628339 (ran)
Messenger RNA biogenesis [BR:pov03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109628339 (ran)
Ribosome biogenesis [BR:pov03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    109628339 (ran)
  Pre-60S particles
    109628339 (ran)
Transfer RNA biogenesis [BR:pov03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    109628339 (ran)
Chromosome and associated proteins [BR:pov03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     109628339 (ran)
   Spindle formation proteins
    109628339 (ran)
Exosome [BR:pov04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109628339 (ran)
GTP-binding proteins [BR:pov04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    109628339 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RNA_helicase Gtr1_RagA AAA_24 ArgoMid Pox_A32 TsaE AAA_7 DUF5906
Other DBs
NCBI-GeneID: 109628339
NCBI-ProteinID: XP_019940972
LinkDB
Position
Unknown
AA seq 217 aa
MAESVVQCVAVFKLVLVGDGGTGKTTFVKRHITGEFEKKYVATLGVEVHPLMFHTNRGPI
RYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVL
CGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAM
PALAPPEVHMDPTLAAKYEQELHVASQTALPDDEDDL
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcggagtcagttgttcagtgtgtggcggtgttcaagctggtgttggtaggagatgga
ggcaccggaaaaacaacttttgtgaagagacacatcacaggagagtttgagaagaaatat
gtcgctactctgggagttgaggtgcaccctctgatgttccacacaaacagaggacccatc
aggtacaatgtgtgggacacagctggtcaagagaagttcggaggcctgagagatggatac
tacattcaagctcagtgtgctatcatcatgtttgacgtcacctctcgagtcacctataag
aacgtgcctaactggcatcgtgacctggttcgtgtatgtgagaacattcccatcgtcctt
tgtggcaacaaggtggacattaaagacaggaaagtcaaagccaagagcatcgtatttcac
cgcaagaagaacctgcagtactatgacatttctgccaagagtaactacaacttcgagaag
cctttcctgtggctagcaaggaagttgattggtgatcccaacctggaatttgtggcaatg
cccgccctcgctcccccagaggtccacatggacccgacacttgctgcgaagtatgagcaa
gagcttcatgttgcatcacaaacagcactgccagatgacgaagatgacctctaa

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