Paralichthys olivaceus (Japanese flounder): 109632693
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Entry
109632693 CDS
T06037
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04115
p53 signaling pathway
pov04210
Apoptosis
pov05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109632693 (apaf1)
04115 p53 signaling pathway
109632693 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109632693 (apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
APAF1_C
WD40_CDC20-Fz
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
APAF-1-like_WHD
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
NB-ARC
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
CARD
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
RMC1_N
Ge1_WD40
Beta-prop_TEP1_C
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_Vps41
WD40_like
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_SPT8
AAA_16
CARD_2
WDR54
Nucleoporin_N
VPS11_N
Dark_WHD
Motif
Other DBs
NCBI-GeneID:
109632693
NCBI-ProteinID:
XP_019947675
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MALEEGARSCLLRFRHRLEEDIKASYLMDHIISDGVMSVDEEERIRTQPTRKDQAVALLE
LLLRKDNRAYISFYNALVKEAYDDLANMLHDDLPQVSENAHKSYSDGCTSYVVLSEGGVP
QRPVVFVSRPELLNRVREKLYRLKNEPGWVTIFGMAGSGKSVLAAEAVRHQGVIEECFPG
GIHWLSIGQLDKPDLLVKIQSLCFRLEQHLEQHLDTQSLHRPLNSLDEAKERLRFLMLRR
YPRLSCLDHPDVLFSSPLVVSLIGALLKEKPNRWRYYLCQLQQKQFKRIRKSSSYDYDAL
DQAMAASIEVLPDEHRELYKDLTVMEKDIKIPAKVLSVLWDLELEEVEDILEEFVNKSLL
FVDTHNKPCLYYLHDLQLDFLVEQNRAQLESLHSKVVRQYQQHYRNGPPISGDEECLYWI
RFLTYHMAKANLTQELYSLMFSLDWVSIKAKIMGPAHLINDYVEYGPILDKENSEVRSQF
QEFLSLNGHHLEQRPFPDVVQLALSQPHSSDVYKQALLQAQHRASEGQLYFDWLNKSSVE
TLSRLVIHPHQGSIYSACFSHDGAKIATCGASKTLKVFRSTTGEKLTEIQAHDDEVLCCA
FSPDDRLLATCSSDRKVKVWNVERAMLLRVFAVEHEEQVNHCQFTNTRRQLLLATCSDDK
LLNVKLWNLNRPSSQNAMFGHFEPVNHCCFSPDDTYLSTSSNDGTVKLFQVSSANEWKTI
NVNSMFTESDEAILVKCSTWTADGKRIACAARNSVLVFDVETSDMLLEIKTNRLSTVQYC
HACPTSNLLAIAFSNYAVELWDLESNKKMADCSGHLSWVQCVQFSDDGSQLLSCSDDQTV
RLWETKKVHTTSAVCLKRDSDVLFCDEEITVSAADNCNRLQVRDGKTGSVLFQSEEQSSR
IRCTCLCKQPSAVALGQEDGTVKVLEVPSGKLLATLLGHTKTVLHCQFSQNGQTLITSSE
DTTIRVWRWQSGEGRVLQGHREQVRCFSRLNSSEADTRLLSWSYDGTVKVWDIESGEKLQ
DINAHQGAILSCHVSPDGCLFATTSADKTAKLWRCESWQCLHTLSGHQDCVRSCRFSWDS
QCLATGDDNGEIRWWDVERGEALQTFYPAGSALKRIHVSSDFSTFVTIDGIGILYILQRV
V
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggaggaaggggcgcggagctgtctgcttcgctttcgccacagactcgaagaa
gacatcaaggcctcgtacctgatggaccacataatcagtgatggtgtcatgagcgtagat
gaggaggagaggatcaggactcagcccaccagaaaggatcaggctgtggctctgctggag
ctgctgctgcggaaggacaaccgtgcctacatctccttctacaacgccctggttaaggag
gcatatgatgatttggccaacatgcttcacgatgaccttccgcaggtctcagaaaatgca
cacaagagctactctgatggttgcacatcttatgtggtgctgagtgaaggtggtgttcca
cagaggcctgtggtgtttgtcagcagaccggaacttttgaaccgggtaagagagaaactc
taccggctgaaaaatgaacctggctgggtcaccatcttcggaatggctggctcaggcaaa
tctgtactggccgcagaggctgtcagacaccaaggtgtcattgaagagtgcttccctgga
ggcatccactggttgtctatcggccagctggacaaaccagaccttctggtgaagatccag
tcgttgtgtttccgcctggagcagcacctggagcagcacctggacacacagtctctccac
cgccccctcaactctctggatgaagccaaggagcgcctgcgcttccttatgctgcgcaga
tacccaaggttgtcatgcttagatcatcctgatgtacttttcagctcccctctggtggtg
tccttgatcggggccctgctcaaggagaaacccaaccgctggcgttactacctctgccag
ctgcagcagaagcagttcaagcgtatacggaagtcctcatcttatgactacgacgccctg
gaccaagccatggctgcgagcatcgaggtcctgcctgacgaacatcgagagctctacaag
gacctcactgtgatggagaaggacattaaaatcccagctaaggtgttgtctgttctgtgg
gacctggagctggaggaggtggaggacattctcgaggagtttgtcaacaagtccctgctt
tttgtggacactcacaacaaaccctgcctgtattacctccacgatcttcagctggacttc
ctggtggagcagaaccgtgcccagctcgagagtcttcactctaaagtggtgcgtcagtat
cagcagcactacagaaacggtcctcccatctcaggagacgaggagtgtctttattggatc
agatttctgacgtaccacatggctaaagccaaccttacccaggagctctactccctcatg
ttttctctggactgggtcagcatcaaggccaagataatgggtccagcgcacctcatcaac
gactatgtggagtatggaccaattctggacaaagagaacagcgaggtgcgcagtcagttc
caggagttcctgtctctgaacggccaccacctggaacagcgtcctttccccgacgtggtg
cagctcgctctgtctcagccacactcatccgatgtctataaacaggctctgctgcaggca
cagcaccgggccagcgagggacaactctactttgactggctgaataagagcagtgtggag
actctctcccgtctggtgatccaccctcaccagggctccatctactctgcctgcttctcc
catgacggagccaagatcgccacctgtggagccagcaagacactcaaggtgtttagaagc
accacgggcgagaagctcacagagatccaggcccacgatgatgaggtgctctgctgcgcc
ttctccccggacgaccgtctcctagcaacctgctctagtgacagaaaagttaaggtttgg
aatgtggagcgagccatgctgctgagggtctttgcggtggagcacgaagagcaggtcaac
cactgtcagttcacaaacacgagacggcagctcctcctggccacctgctccgacgacaag
ttattgaatgtcaagttgtggaacctcaacagaccgtcctcccagaacgccatgtttggg
cactttgaaccagtcaaccactgttgtttctcccctgatgacacctatctgtccacttct
tccaacgatggcactgtgaagctatttcaggtgtcgtccgccaacgagtggaagacgatc
aacgtgaacagcatgtttaccgagagcgatgaagccatcctcgtcaagtgcagcacctgg
actgcagatggcaaacgtatcgcatgtgccgccaggaacagtgttttggtgttcgatgtg
gagacgtcagacatgttgttggagatcaaaacaaatcgtctgagcaccgtgcagtactgt
cacgcctgtccgaccagtaacctgctcgccattgccttctcaaactacgctgtggagctg
tgggacctggagtccaataaaaagatggctgactgcagtggacacctgagttgggtccag
tgtgtccagttctctgatgacggatcacagctgctctcgtgctccgatgaccagactgtc
aggttatgggagactaagaaggttcacaccacctctgccgtctgtctgaagagagactct
gacgttctcttctgtgatgaagaaatcaccgtatcggctgccgacaactgcaacaggctg
caggtacgtgatggcaagacgggatcagtgctgttccagtcagaggagcagtcgtccagg
atcaggtgtacctgtctgtgcaagcagccctctgcagtggctctgggacaagaggatgga
acagtaaaggtgttggaagtgccctctgggaagcttctggccactctgctgggacatacg
aagacggtgctgcactgccagttcagccagaacggccaaaccctgatcacatcctccgag
gacaccaccatcagggtgtggaggtggcagtctggcgagggtagagtactccagggtcac
agagagcaggtcaggtgcttctctcggctcaacagctcagaggccgacacaagactgcta
tcctggtcctacgacggtactgtcaaggtgtgggacatagaaagtggagagaagctgcag
gacatcaacgctcatcagggagccattctgtcctgtcatgtctctccagacggttgcttg
ttcgccaccacctctgctgacaagactgctaagctctggcgctgtgagtcctggcagtgc
ctccacacgctaagcggtcaccaagactgtgtccgaagctgcagattctcctgggacagc
cagtgcctcgcgactggggacgacaacggagagattcggtggtgggatgtggagcgaggc
gaggccctgcagaccttctatccagctggaagcgctttgaagaggatccacgtgtcgtcc
gacttctccaccttcgtcaccatcgacggcattggcatcctctacatcctccagagggtt
gtgtga
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integrated database retrieval system
