KEGG   Paralichthys olivaceus (Japanese flounder): 109633411
Entry
109633411         CDS       T06037                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109633411 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pov03041]
    109633411 (smndc1)
Spliceosome [BR:pov03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109633411 (smndc1)
 Complex B
    109633411 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109633411 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR SH3_Hsr9 RskA_C
Other DBs
NCBI-GeneID: 109633411
NCBI-ProteinID: XP_019948814
LinkDB
Position
Unknown
AA seq 238 aa
MSDDLVKQLSSYKAQLQQVEVALSTDQDNEDLLKLQKDLQEVIDLTKDLLTAQPSDGAST
TNGSDTVPVKHSWKVGDRCMAHWSQDGQVYEAEIEEIDRENGTAAVTFSGYGNAEVIPLQ
NLKAAEEGKRSDEDGNMKPKSRKEQIAEQREYKKKKAQKKVLRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggacgacttggtgaaacagttgagcagctacaaagctcagctgcagcaagtggaa
gttgctctgtcgaccgatcaagacaatgaagatctgcttaaactccagaaagacttgcag
gaagtcatcgatttgactaaagacctcctgaccgcacagcccagtgatggtgcttccact
accaacggctccgacactgttcccgtgaagcacagctggaaagtgggagacaggtgtatg
gctcactggagtcaggatggacaggtgtatgaggctgagattgaggagatagaccgagag
aacggcactgcagctgttaccttctctggatacgggaacgctgaagtaatccccctgcaa
aacctcaaagcagcagaggaggggaaacgttctgatgaggatgggaacatgaagccaaaa
tcaaggaaagagcaaatagcggagcagagagaatataagaagaagaaagcccagaagaag
gtactgaggatgaaggagttggagcaggagagggaggaacagaagtcaaagtggcaacag
ttcaacaacaaagcctactcaaagaacaagaagggacaggtaaagaggagcatcttcgcg
tctccagagagcgtgaatggaaaggtcggagtgggaacatgtggtattgcagacaagcca
atgacccagtacaacgacacgtcaaaatacaacgtcagacatctaatgccccaatga

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