Paralichthys olivaceus (Japanese flounder): 109634028
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Entry
109634028 CDS
T06037
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109634028 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109634028 (eftud2)
Spliceosome [BR:
pov03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109634028 (eftud2)
Complex C
U5 SnRNP specific factors
109634028 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
109634028
NCBI-ProteinID:
XP_019949815
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLDAEDRDVDEGDEDDDDEPADADDEVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNKQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDMDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRLSDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIGELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNAQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIKPLLRLVCN
RFFGEFTGFVDMCVHHIPSPQEGARNKIEHTYAGGLDSDLGEAMAECDPEGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQICTVGRLWINVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEDAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKGIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagatctgtatgatgagtttggaaactacatcggtccagagctggactctgat
gatgatgaagatgatctggatgcagaggacagagatgttgatgagggcgatgaggatgat
gacgacgaacccgctgatgccgatgacgaagtcccaggcatggaggtggttctgcatgag
gacaagaagtactatcccacagcagaggaggtttatgggcctgaagtggaaactatcgtc
caggaggaagatacacaacctcttacagagcccattatcaagcctgtgaagaacaagcag
ttcaccctgatggagcaagagttacctgccactgtttatgatatggaattcctcgcagat
ctgatggatggtcctgagcttatccgtaatgtcaccctttgtggccacctgcatcatggc
aagacgtgttttgtcgactgcctaattgaacagacacatccagaaatcaggaagagatat
gacatggatctgcgatacactgacatcctctttacagaacaggagagaggagtcggtatc
aagagtacccccgtcacaatggtcctgccagactccagaggcaaatcttacctctttaac
atcatggatacaccaggccacgtgaacttctctgacgaggtcacatcgagcatccggctc
tctgacggcgttgtcctcttcatagatgcagcagaaggagtgatgctgaacacagagcga
ctaatcaaacatgcggttcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcatcggggagctcaaactgccgcccacagatgcttattataaactgcgccacatc
gtcgatgaggtcaatggtttgctcagcacatactccaccgatgagaacctggtggtttcg
cctctccttggaaatgtttgcttcgccagctctcagtacagcatctgcttcaccctgggc
tcctttgcaaagatctactcagacacctacggtgacatcaactataatgagtttgccaag
aggctctggggagacatttatttcaatcccaaaactcgcaagttcacaaagaaagctccg
agcagtaacgcccagcgaagctttgtggaatttgtgctggagcccctctacaagattctt
tcacaggtggttggggatgtagacacttctctccctcgagttctggatgagctggggatc
cacttgactaaagaggaactgaagctgaacatcaaacccctgctgaggctcgtctgcaac
cgcttctttggggaattcactggctttgtggacatgtgtgtgcatcacatcccctcacca
caagagggcgcccggaacaagatagagcacacctacgcaggaggtctggactcagacctg
ggggaggcgatggcggagtgtgaccctgaaggtcctttgatgtgccacaccactaagatg
tacagcactgaggacggggtccagttccatgcgtttggcagggtgctgagtgggaccatt
caggcaggacagcccgtcaaggttttaggagagaactacacccttgaggatgaggaggac
tcccagatctgcaccgtgggccgcctgtggattaatgttgccagataccagattgaagtg
aatcgagtacctgctggcaactgggtcctcatcgaaggatgtgatcagccaattgtcaaa
accgccacaatcactgagcccaggggcaacgaagatgctcagattttcagaccgttgaag
tttaacacagcgtcagttatcaagattgcagtggagcccgtcaacccatcagagcttccg
aaaatgttggacggactgaggaaggtcaacaagagctatccatctctcaccacgaaggtg
gaagagtctggagaacatgttatcttaggcacaggagaactctacctggattgtgtcatg
cacgacctgcggaagatgtactctgagattgacattaaggtcgctgacccagtggtgacc
ttctgtgaaacagttgtggagacatcatctctcaagtgctttgctgaaacaccaaataaa
aagaataagatcaccatgattgctgagcccttggagaaagggctggctgaggacatagag
aacgaagtggtgcagatcacgtggaacaggaagaagctgggagagtttttccagacaaag
tacgactgggatctgctggctgccaggtctatctgggccttcggaccggacacgacgggg
ccaaacattcttgtagacgacacgctgccttctgaggtggacaaggcgctgctgggctcg
gtcaaagacagcatcgtccagggtttccagtggggcaccagggagggacctctgtgtgat
gagcccatcaggaacgtcaagttcaagatcctggatgcagtcatcgctcaagagcctctc
cacagaggaggaggccaggtcatccctacagccaggagagtggtgtactctgctttcctc
atggccacaccaaggttgatggagccctattactttgtggaggttcaggctccagctgat
tgtgtctctgctgtctacacagtgctggcgagaagaaggggtcacgtcactcaggacgca
cctatcccagggtctccgctctacaccatcaaagctttcatcccggccatcgactccttt
ggctttgagacagaccttcggacacacacacagggacaggccttcgctctgtctgttttc
caccactggcagatcgtgcccggtgaccccctggacaagggtattgtgatcaggcctcta
gagccccagcctgccccccacctggccagagagttcatgatcaagacccgaagacgcaag
ggtctgagcgaagatgtgagtatcagcaagttctttgacgatcctatgttgttggagctg
gccaaacaggacgtggtgctgaactaccccatgtga
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integrated database retrieval system
