Paralichthys olivaceus (Japanese flounder): 109636170
Help
Entry
109636170 CDS
T06037
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04115
p53 signaling pathway
pov04145
Phagosome
pov04148
Efferocytosis
pov04350
TGF-beta signaling pathway
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
pov04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109636170
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109636170
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109636170
04148 Efferocytosis
109636170
09143 Cell growth and death
04115 p53 signaling pathway
109636170
09144 Cellular community - eukaryotes
04510 Focal adhesion
109636170
09142 Cell motility
04820 Cytoskeleton in muscle cells
109636170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109636170
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pov00536
]
109636170
Membrane trafficking [BR:
pov04131
]
Endocytosis
Phagocytosis
Opsonins
109636170
Glycosaminoglycan binding proteins [BR:
pov00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109636170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
cEGF
Laminin_G_3
EGF
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
109636170
NCBI-ProteinID:
XP_019953313
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MKLTGIFLLLMVWSCEAARVAESRDDNSVHDLFDLIQVPKKNHGVTLVKGDDPYSPAYKI
LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKKDGSGPVFEIVS
NGKANTLDIVFSTENKQQVVSIEDVDLATGHWRNITLFVQEDRAVLYAGCDEVNTAELEA
PIQSILTHETPASAQLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSITSDTM
ILENLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLVGMFKELKSLGVVVKELSNELRQLTD
ENKLIKSHIDIHSGVCIHNGIVHKNKDEWTVDDCTECTCQNSATVCRKISCPLISCANAT
IPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTR
DCYLQECDKRFKQDGGWSHWSPWSSCSVTCGSGVITHIRLCNSPNPQLGGKDCVGEGRQT
EKCQMDPCPINGNWGPWSPWDTCSLTCGGGVQTRKRLCNDPAPKYGGKECVGEAKVTQIC
NKKACPIDGCLSNPCFAGAKCTSFPDGSWKCGKCPAGYSGNGIKCKDVDECQEVPDACFE
FNGVHRCENTEPGYNCLPCPPRYSGPQPFGRGVEHAAAHKQVCTPRNPCLDGSHDCNKNA
RCNYLGHFADPMYRCECRPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNL
PNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFIFNPRQYDYDRDDVGDRCDNCPYDS
NPDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHN
PDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDND
GIPDDKDNCRLAFNPDQLDTDGDGRGDACKDDFDQDNVPDIYDVCPENFGISETDFRQFQ
MVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNAVDFSGTFFINTERDDD
YAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALW
HTGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADTGSIYDK
TYAGGRLGLFVFSQEMVYFSDLKYECRDA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacggggatatttttgttgttgatggtttggagctgcgaggctgcgagagtc
gcagagagcagagacgacaatagcgtgcacgacttgtttgatctcatccaagtccccaag
aagaaccacggggtcaccctggtgaaaggagacgacccgtacagccccgcctacaagatc
ctcaacccggacctgatccccccggtccccgagagcgcctttagggacctcatcgactcc
atccacgccgagagaggattcctcctgctgctcaacttcaagcagttcaagcggacccgg
gggagcctcctgaccgtggagaagaaggacggctccggacccgtgtttgagatcgtctcc
aacggcaaggcgaacaccttggacatagttttctccaccgagaacaagcagcaggtggtg
tccatcgaggatgtggatctggccacgggtcactggaggaacatcaccctgttcgtgcag
gaggaccgggcggtgctgtacgcgggatgcgacgaggtgaacaccgcggagctggaagcg
cccatccagagcatcctgacgcacgagactccggccagcgcgcagctccggattgggaag
ggagcggtgaaggacaggttcatgggggtcctacaaaatgtgcgctttgtgtttggaaca
actctcgatgccatcctccgcaacaaaggatgccaaaactccataacatctgacaccatg
atcctggagaacctgaatggttcctcagccataagaacagagtacactggacataagacc
aaagacctgcagatggtctgtggcttctcctgtgaggacttggtcggcatgtttaaggag
ctgaagagcctcggtgtggtggtgaaggagctttccaatgagctccgacagctgacggat
gaaaacaaactgataaaatcccacatcgacattcacagtggcgtctgcatccacaacggc
atcgtgcacaagaacaaagacgagtggaccgtcgacgactgcaccgagtgcacttgtcag
aactctgctactgtgtgccgcaagatctcctgccccctgatctcctgtgccaacgctact
attcctgatggagagtgctgcccccgctgtggaacaccgagtgactatgcagaagacggc
tggtcgccgtggtctgaatggacccattgttccgtgtcatgtgggcggggcatccagcag
cgtgggcgctcctgcgaccgtatcaataacaactgtgagggcacctcagtgcagacccgt
gactgctacctccaggagtgtgacaaacgcttcaagcaggacggtggttggagccactgg
tcaccctggtcttcctgctccgtcacctgtggttctggtgtcatcacccacatccgcctc
tgcaactcccccaaccctcaacttggcggcaaagactgcgtgggagagggcagacaaaca
gagaaatgtcagatggatccgtgccccatcaatggcaactgggggccgtggtcaccatgg
gacacatgcagtcttacctgtggaggtggtgtccagactcgtaaacgcctgtgcaatgac
cctgcaccaaagtacggtggcaaagagtgtgttggtgaagccaaagtcacccagatatgc
aacaagaaagcctgccccatcgatgggtgtctgtccaatccctgctttgctggagcaaaa
tgcaccagtttccctgatggttcttggaaatgtggcaagtgtccagctggttacagcggc
aacggtatcaagtgcaaagatgtcgatgagtgccaagaggtgccagacgcttgctttgag
tttaatggtgtccatcgctgtgagaatacagaaccaggctacaactgtctgccctgccct
cctcgctactcaggaccccagccctttggcagaggtgtggagcatgctgcagctcacaaa
caggtgtgcacaccccgtaatccctgcctcgatggaagccatgactgtaataaaaacgcc
cgctgcaactaccttggacacttcgccgatcccatgtaccgctgcgagtgtaggcccggt
tatgctggcaatggccatatctgtggagaggacacggacctcgatgggtggcccaacgct
gacttggtttgtgtggagaatgccacctaccactgcaaaaaggacaactgccccaacctc
cccaactctgggcaggaagattacgataaggacggcattggagatgcttgtgacaatgat
gatgacaatgatggcattcctgacgatagggacaactgtccattcatcttcaaccccagg
cagtacgattatgatcgtgatgatgtgggtgaccgctgtgataactgcccctatgacagt
aatccagaccagacagacacagacaacaatggagagggagatgcctgtgctgtggacatc
gatggagatggtatattaaatgagaaggacaactgtccttatgtgtacaacgtcgaccaa
agagacacagatctggacggagttggagacatgtgtgataactgcccgctggaacataat
cctgatcaggtggattcagacgatgaccgtgtgggagacaagtgtgacagcaaccaggac
attgatgaggacggacatcagaacaatctagacaactgcccgtacatccccaatgccaat
caggctgaccatgacaaggacggcaagggagacgcctgtgaccacgatgatgacaatgat
ggcatccctgatgataaggacaactgcagactggccttcaaccctgaccaactggacact
gatggtgatggccgtggtgatgcttgcaaagatgacttcgaccaagacaacgtgcctgac
atctatgacgtgtgtcccgaaaactttggcatcagcgagacagacttccgccagttccag
atggttcctttggatcccaaaggcacctcccagattgatcctaattgggttgtgcgccat
cagggcaaagagctcgtccagactgtcaactgcgaccctggcattgctgttgggtaccat
gagtttaatgcagtggacttcagtgggaccttcttcatcaacacagagagggatgatgac
tatgccggctttgtgtttggctaccagtccagttccaggttctatgtggtgatgtggaag
cagattacgcagacctactggtcaaataaacccaccaaggcccaggggtactccggcctg
tccattaaagtggttaattccactactggtcctggagagcacctccgaaacgccctctgg
cacaccgggaatacccctggacaggtccgcaccctatggcatgacccaaagaatgttgga
tggaaagacttcactgcctacagatggcatctgatccacagaccaagaacaggacatatt
agagttgtgatgtacgagggcaagaagatcatggcagatactggtagcatctatgacaag
acatacgcaggtggcaggctaggtctttttgtcttctcacaagagatggtatacttttca
gacctcaagtatgaatgcagagatgcataa
DBGET
integrated database retrieval system
