Paralichthys olivaceus (Japanese flounder): 109641645
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Entry
109641645 CDS
T06037
Name
(RefSeq) interferon regulatory factor 5-like isoform X1
KO
K09446
interferon regulatory factor 5
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109641645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109641645
Transcription factors [BR:
pov03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109641645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
109641645
NCBI-ProteinID:
XP_019961721
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MLQSADMSVQPRRIRLKPWLLAQVNSGRFPGLQWINAEQRLFQIPWKHATRHTSTSDEEN
TVFKAWALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVRPYKIYEVC
EQPASAGDVTGGFDDDDDDEEMPNLMDLTINPRISDPSPFNQFSLSSNEVFGPHHVISMP
LLPVTADLQAPGQNFVSGLSTRLQDLNSLPPPAASVAPGSDLMEASSIGEIQNQQPCKYD
LLSSVPLTDLDLKFQYRGRIMGSLTVSNPQGCRLYSGHLEPSPEQVDLFGPVTLQQVLFP
GTSEIQNQKQRFYTEALLDVMDRGLILEIWEQDIYAIRLCQCKVFWSGPGTTEQSPPNPL
EREKKIKVFSLNDFLQALILFQKGEATNPPPFEIYFCFGEDWPDKKPKEKKLIIVQVVPV
VARILTEMFSGELSWSTDSIRLQISNPDVKDQTVEQFKELQKLLQSQHIQGPWTPNVP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagagcgctgacatgagcgtccagcctcggaggatccgtctgaagccatggctc
ctggcgcaggtgaacagtggcaggtttcctggtctccagtggatcaacgcagaacaacgc
ctcttccagatcccctggaaacatgctacacgccacacgtcgacgtctgatgaagaaaac
actgtcttcaaggcatgggctcttgagacaggtaaatatcaggaaggtgttgatgaacct
gaccctgccaagtggaaggcgaaccttcgctgcgctctgaacaagagtcgagagtttcag
ctgaaatacgacggaaccaaagagacgccggttcgcccgtacaagatctacgaggtgtgc
gagcagccagcgagtgcaggtgatgtcacaggtggctttgatgatgatgatgatgatgaa
gagatgccaaacctgatggacctcaccatcaatcccaggatcagtgacccctcccccttc
aatcagttcagtttatcttccaatgaggtgtttgggcctcatcatgtgatctcgatgccc
ctcctccctgtgactgctgaccttcaggccccgggtcagaactttgtctctggactctcg
accagactccaggacttgaactctttgccgccccctgctgcctctgttgcccctggatcg
gacctgatggaggccagcagcataggagagatccagaaccagcaaccctgcaagtacgac
ctgctcagcagtgtcccactaacagatctggacctgaagttccagtaccggggtcggatc
atgggctcgctgactgtgagcaaccctcagggctgccggctatactctggccatctagag
ccaagcccggaacaggttgacctgtttggacccgtcactctgcagcaggtcctgttccca
gggacgtctgagatccagaaccagaagcagcggttctacacagaggccctgctagacgtg
atggaccgaggcttgatcctggagatctgggaacaggacatttacgccatccggctctgt
cagtgtaaggtgttctggtctggaccgggaacaaccgaacagagtccaccaaaccccctg
gagcgggagaaaaagatcaaagttttcagtctgaatgacttccttcaagctctgatcctg
ttccagaaaggtgaagctacgaaccctccaccctttgagatctacttctgctttggggag
gattggcctgacaagaaacccaaagagaaaaaactcatcatcgttcaggtggttcctgtt
gtggctcgcatcctgacagagatgttctcaggagaactcagctggtcgaccgacagcatc
cgactacagatctcaaaccctgatgtcaaggaccagacggtggagcagtttaaagaactg
cagaagctcctgcagagccaacacatccagggtccctggacccccaacgtgccctga
DBGET
integrated database retrieval system
