Paralichthys olivaceus (Japanese flounder): 109642027
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Entry
109642027 CDS
T06037
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov00900
Terpenoid backbone biosynthesis
pov01100
Metabolic pathways
Module
pov_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
109642027 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pov01006
]
109642027 (ggps1)
Enzymes [BR:
pov01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
109642027 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
109642027 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
109642027 (ggps1)
Prenyltransferases [BR:
pov01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
109642027 (ggps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Candida_ALS_N
Motif
Other DBs
NCBI-GeneID:
109642027
NCBI-ProteinID:
XP_019962219
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MLVSSVANSSTGPACQQTDRPRRSVDFCTFEAMDCDSGAASERILLEPYKYLLQLPGKQV
RTKLAQAFNHWLNVPEDKLQVIIQVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYGIPS
VINSANYVYFLGLEKVLTLEHPEAVQIFTQQLLELHRGQGLDIHWRDTYTCPTEQEYRNM
VLQKTGGLFGLAVGLMQLFSDWKQDLKPLLDTLGLFFQIRDDYANLSSHKYSENKSFCED
LTEGKFSFPIIHAIWSRPESTQVQNILRQRTENMDIKRYCVDYLEKIGSFAYTRQTLRDL
EVEAYSFIEQCGGNPQLESLIKHLSKMHHKAEATAESNPEPHSSQNH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctagttagcagtgtggctaacagcagcacaggaccggcttgtcagcagacagacaga
cctcgtcgaagtgtagatttttgtacatttgaagcaatggattgtgactcaggagcagcc
tctgagcgaattctgttggagccatacaagtacttgttgcaactgccaggaaagcaagtg
aggacaaaactggcccaagcattcaaccactggctcaatgttccagaggacaaactgcag
gtgatcatccaggtgacggagatgctgcacaatgctagcctgctcatagatgacatagag
gacagctccaagctgcggcgtggcttccccgtggcccacagcatctacggtattccctcc
gtcatcaactcagccaactacgtctacttcctgggattggagaaggtgctaaccctggag
catcccgaggccgtccaaatttttacccagcaactgctggagctgcaccgtggccagggc
ctggacatccactggagggacacctacacttgtcccactgagcaggaatatcgcaacatg
gtgctgcagaaaactggggggctctttggtttggctgtgggcctgatgcagctcttctca
gattggaaacaagacctgaaaccgctactggacacactgggtctcttcttccagatccgc
gatgactacgccaacctgagctcccacaagtacagcgagaacaaaagcttctgcgaggac
ctcacagagggcaagttctcttttcccatcattcatgccatatggtcgcgtccagagagc
acccaagtgcagaacatcctgaggcagcgcacggagaacatggacatcaaaaggtactgc
gtggactacctggagaagatcggctcgtttgcctacacccgtcaaactctgcgtgacctg
gaggtggaggcgtacagtttcatcgagcagtgtggggggaaccctcaactggagagcctg
atcaaacacctcagcaaaatgcatcacaaggctgaagcaacggcagagtccaatcctgag
ccgcactccagccaaaaccactga
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