Paralichthys olivaceus (Japanese flounder): 109642030
Help
Entry
109642030 CDS
T06037
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pov04040
]
109642030
Ion channels [BR:
pov04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109642030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
Na_trans_assoc
IQ
Motif
Other DBs
NCBI-GeneID:
109642030
NCBI-ProteinID:
XP_019962224
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MKTWFLDFWREREEVLKRTKQLRLRPPQLKRLLGDSSVRTELQNARLACLLPPVGTEVFR
RFMPASLQDIQQQQHEVKEMEHQKRKNKEVRKVEKELHKQDTHLEAGKHLPFIYGDPPPE
LLNCPLEELDPFYQSQKTFIVLSIGNVLHRFNAESSCFLLSPFNRLRTFAIRILLHSLFR
LFIMITILTNCGFMMMSVHPTWTTITAEFVFSAVYIFEVIVKIMSRGFCVGRFTFLRDPW
NWLDIVVVITALGLGVKSSAGALVQSVKRLAGVIIMTVFVLSVLAVIGQNLFMGALKHKC
VLEWSHSNWTYNDLSNYDNYEGGSSDFDFHKFINSKVNHFYLSGQSDPLQCGNTSNAGVC
PHGYICLKTSTNPDYGHTNFDSFGSSLLNLLRLMTHDTMMRSAGKSSVIFVLLVFSGGFW
LLSCVLVVVAMAVVEQEKASIAEARRTEEEFLHILDVIKKREEEGEEEEEEPQDDQRLSP
PCFLSKWTWNCCGCWQELRLRLNGFVMDPFFDLVIIICLILNCIVMSMEHYPMTVEFEEM
FMPTQLVFTGIFAVEMLLRLVAMNPYDYFQVGWNVFDSIIVALSLLGLVFAEFEGAHIDL
MRVLRLARWWPTFHMFLKLIWTSVLALRNLTLILLTMVFIFTVVGMQLFQDNYSDFVCRI
STDCQLPRWHMKNLFHTFVLVFRILCGEWIENMWDCMQVSSPSVCLMFFIMVLVFGHLLV
LNLFLVLLMSSIGDDLVAPKEKVKNHLIIAVDQIKRGVAWTRAWILEHIWTLVGKKNPII
PHHKVVNSEEDKKDYLGLTSVTSDQPLSESKACGSNHGNQTSKYNFEKVPVAEAEVEFDM
PENEEEKHKQDEENKTRRNNTPEDCCCDSTDTHAHTVLEDIHLQQRKLVQMLLDKADQVF
TFIFLLEMLLKWIALGFRKYFTSVWCWLDFLILAVSLMSLSLGMLGYSELGAGLSLRTLR
ALRPLRALSRFQGLRLVLNTLVATVPSMCDAMLVCLLVWLMFSIMGVNLFSGKFYYCFNE
TAEQQFLPEEVNNMTQCLFLIHENVSDVSWKNTKLNFDNVAEGYRSLLQVATFNGWLDVM
YAAVDTRQMLSQPVYESNVYMYIYFISFIIIGCFFTSNLFIRRFIHSLDQLRHKFGGKHF
FMTDEQHNFSISMKKLFSRKRPSVPRPQNQCQARLFDLVTKHSFEIFMVIVICLYTVTLM
METDLQSMEMELILFWLYFVFIIIFLIEFLLKIIALRQHYFSDCLNVLDFVVLLILVVGF
LFSDICEKYFIDIKVLALLRLAPVTRIIHLVPCMRGIKRLFLALVMSLPALFNICLLLFL
LMFTFSVFGMLSFAHVKNTARFHDMFNFETFLNSMICMFTMTTMAGWNTVLSPILNTPLD
CDPDKDTPVGGDCVHPTVGIIFITSYITLSLLLVVLLYTAVVLETFNMYDTETPSDEDLL
MFYKTWRRFDCDNSHIIPYSKLSDFCDALQDPLRIPKPNTFKLIHMDLPLLPGDKIHCVD
VLFALTAQIFGDRGQMDSLKARMEEKFMINNLSKMSYEPISSTLQRKQEEVAATVIQKAY
RKHLLKDGDADEMTAEPAGGAAAV
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctggtttctcgacttctggagagagagagaggaagttctgaagagaaccaag
cagctgagactccgccctccacagttaaagcggttgctaggagacagttctgttaggaca
gagctgcaaaatgccaggttggcatgtctgctgccccctgttggtacagaggtcttcaga
cgcttcatgccggcctcgttgcaggacatacaacaacaacaacatgaagtcaaggagatg
gagcatcagaagaggaagaacaaagaagtacgaaaggtagagaaagagctgcacaaacaa
gacactcacctggaggcagggaagcacctccctttcatctacggagacccgccccctgag
cttctcaactgcccactggaggagctggatcccttctaccaatcacagaagacgttcatc
gtgctcagtatagggaacgtcctccacaggtttaacgcagagtcatcgtgtttcctgctg
agtccattcaatcgtctgaggaccttcgccatcaggatcctgcttcattctttgttccgt
ttgttcatcatgataacgattctgacaaactgtgggttcatgatgatgagtgttcatcca
acatggacaacaataacagcagagtttgtgttctcagccgtctacatctttgaagtcatc
gttaagatcatgtcgagaggattctgtgtcggacgcttcacgttcctcagagatccgtgg
aactggctggacattgtggtcgtcattacagcgttagggttaggtgtgaagtcatctgcc
ggagctctcgtccaatcagtgaagagactggctggtgtcatcatcatgacggtgtttgtc
ttaagtgtcttggctgtgattggtcagaacctcttcatgggagctctgaaacataaatgt
gtcctggagtggtcgcatagcaactggacctacaatgacctcagcaattacgataactat
gaagggggaagtagtgactttgatttccacaagttcatcaacagtaaagtgaatcacttc
tatctctctggtcaatctgatcctctgcagtgtggaaacacatctaatgctggggtctgt
ccccatggttacatctgtctaaagaccagcactaatccagattacggacacaccaacttt
gactcgtttggttcgtctctgctgaatctgttaagactgatgacacacgacaccatgatg
cgttcagcaggtaaaagttctgtgatcttcgtgctcctcgtcttctcaggcggtttctgg
ctcctcagctgtgttttggtggtggttgctatggcggtggttgagcaggagaaggcgagc
atcgctgaggctcgacggacagaagaagagttccttcacatcctggacgtgataaagaag
agggaggaggaaggggaggaggaggaggaagagccccaggacgatcaaaggttgtcccct
ccgtgtttcttgtccaagtggacgtggaactgttgtggctgctggcaggagctcagacta
cgtctcaacggcttcgtcatggacccgttctttgaccttgtgatcatcatctgcctcatc
ctcaactgtatcgtcatgtccatggaacattatcccatgacagtggagtttgaagaaatg
ttcatgcccactcaattggtcttcacggggatcttcgcagttgagatgctccttaggctt
gtggccatgaatccatacgattacttccaggtgggctggaacgtctttgacagcatcatt
gttgcactcagtctgctggggctggtatttgctgagtttgaaggggcacatatagacctg
atgcgagtgctgagactggcccggtggtggccgaccttccacatgtttctgaagttaatc
tggacctcggtcttggctctgaggaacctgactctcattctgctgaccatggtcttcatc
ttcaccgttgttggcatgcagctgttccaggacaactactcagacttcgtctgtcgcatc
tcgacggactgccagcttcctcgctggcacatgaaaaacttgttccacacctttgttctc
gtcttcaggatcctctgtggagaatggatcgagaacatgtgggactgcatgcaggtctct
agtccgagcgtgtgtctgatgttcttcataatggttctggtcttcggacacctgctggtc
ctgaatctcttcctggtcttgttgatgagctcgatcggtgatgatctggtggctccaaaa
gaaaaagtcaaaaaccacttgataatcgctgtagaccagatcaaaagaggtgtggcctgg
accagggcctggatactggagcatatttggactttggtagggaagaagaatcccataatc
ccacaccacaaagtggtcaacagcgaagaagacaagaaggactacctgggcttgacgtct
gtgacctcagaccagcccctgtcagagagcaaggcctgtggcagtaaccatggcaaccag
accagcaaatacaacttcgagaaggtccctgtcgccgaggctgaggtcgaattcgacatg
cctgaaaatgaagaggaaaaacacaaacaggatgaagaaaacaagactcgaagaaataac
acacctgaagactgctgctgcgacagtacagacacacacgcgcatacagtgttggaggac
attcacctgcagcagcgtaagcttgtacagatgcttctggacaaagccgaccaggtgttc
accttcattttcctccttgagatgcttcttaagtggatcgccctcggattcaggaagtac
ttcaccagtgtctggtgctggctcgacttcctcatcttggccgtatctctgatgtcattg
agcctcggcatgctgggatattctgaactgggagcaggtctgtctctgaggactctgagg
gctctgaggcccctgagggccctgtctcgcttccagggcctgaggctggtgttgaacacc
ctggtggccactgttccatccatgtgtgatgcaatgctggtgtgtctcctcgtctggttg
atgttcagcatcatgggagtaaatctgttttccggaaagttctattactgtttcaatgag
acagcagagcagcagtttttacctgaggaggtgaacaacatgacccagtgtttgtttctg
atccacgaaaacgtctccgacgtcagctggaagaacacaaagttaaactttgacaacgtg
gcagaaggttaccggtcactgctgcaggtggcaacttttaatggatggttagacgtcatg
tatgcagcagtggataccagacagatgctgtctcagccagtgtacgagtcgaatgtgtac
atgtacatctacttcatcagtttcatcatcatcggctgcttcttcacctccaacctcttc
atcagacgcttcatccactcgctggatcagctgagacacaagtttggagggaaacatttt
ttcatgacagacgagcagcataacttttccatcagcatgaagaaactgttctccaggaaa
cgtccaagtgtccctcgacctcagaatcagtgccaggctcgtctctttgacctggtgacc
aaacattcttttgagatcttcatggtgatagtgatctgcctgtacacagtgactctgatg
atggagacagacttgcagagcatggagatggaattgattctgttctggctctactttgtc
ttcatcatcatcttcctcattgagttcctcctgaagatcatcgctctcagacagcactac
ttctctgactgcttaaacgtcctcgacttcgtggtccttttaattttggttgtaggtttt
ctattctctgacatatgtgagaaatatttcatcgacataaaggtattagctcttctgcgg
ttggctcctgtcactcggatcatccatctagttccttgtatgcggggaatcaagagatta
tttttggccttggtgatgtcacttcctgccctctttaacatttgcctactcctattcctc
ctcatgttcaccttctctgtcttcggcatgttaagctttgcacatgtgaagaacacggca
aggttccacgacatgtttaattttgaaacatttttgaacagcatgatctgtatgtttacg
atgaccacaatggctggatggaacaccgtgctgagtcccatcctaaacacaccactggac
tgcgacccggacaaagatacgccagtcggaggcgactgtgtccacccgactgtgggaatc
atcttcatcacctcctacatcaccctgtccctcctgttggtggtcctcctgtacacagct
gtcgtcctcgagaccttcaacatgtacgacacagaaacgccgagtgatgaggatttgcta
atgttttataaaacctggagaaggtttgactgtgacaactcacacatcatcccatacagt
aagttgtcggacttctgcgatgctctgcaggatcctttgaggattcccaaaccaaacacc
ttcaaactgatccacatggatcttcctctgcttcctggagacaagattcactgtgtggac
gtcctgtttgctctcactgcacagatatttggtgatcgaggacagatggactctctcaaa
gccagaatggaggaaaagttcatgatcaataacttgtccaagatgtcatatgaaccaatc
agcagcaccctgcagaggaaacaggaggaggtggcggcgacagtgatccagaaagcttac
aggaagcacctcctgaaggacggggatgctgatgagatgacagcagagcctgcaggtggc
gctgcagctgtttag
DBGET
integrated database retrieval system
