Paralichthys olivaceus (Japanese flounder): 109642230
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Entry
109642230 CDS
T06037
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04620
Toll-like receptor signaling pathway
pov04621
NOD-like receptor signaling pathway
pov04622
RIG-I-like receptor signaling pathway
pov05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109642230 (traf3)
04621 NOD-like receptor signaling pathway
109642230 (traf3)
04622 RIG-I-like receptor signaling pathway
109642230 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109642230 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
Sina_ZnF
zf-C3HC4_4
zf-TRAF_2
ATG16
zf-RING_UBOX
Fzo_mitofusin
Crescentin
DUF4201
Fez1
MctB
FlaC_arch
GAS
Motif
Other DBs
NCBI-GeneID:
109642230
NCBI-ProteinID:
XP_019962478
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MSAGKSADGREVQIPLQQVAPSVAASLAVVSPLTPPSHRPANPWPPSDPAASHGVAAGFL
PLHEGFRDHFVETPEAKYCCEVCRLVLCQPRQTECGHRFCQSCINRILSQPNPVCPADME
PLFKDKIFRDVCCQREIMALKVYCRSEANGCQEQMSLHQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETTCDFCTTKMPLTDLQKHKETVCPVFPVSCPNHCSSSSLP
RSELSSHQHDCPKAQVICQFHRYGCTFKGLNQEMRQHESTCAAEHLRMMANRSSSLENKV
EEVKGELLERYKVLPALSSRLSDLENQNDELRDKNRQMEQKFSTMQKLMSSHSEKLLEVE
LELRSLRLLREEVENLRGTLESVRVRLTALEQGRSGTGPSTHTLAPLETQLNRHDDMLSV
HEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKM
CARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKP
DPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggaagagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctctgtggctgcctccctcgctgtggtctctcccctcaccccaccctctcaccgccca
gccaatccctggccccccagcgaccctgctgcttctcatggtgtcgctgcaggtttcctg
cctcttcatgaaggattcagagatcactttgtagaaactccagaagccaaatactgctgc
gaggtgtgcaggctggtcctatgtcagcctcgccagaccgagtgtggacaccgcttctgt
cagagctgcatcaaccgcatcctaagtcagccaaacccggtgtgtccagctgacatggag
ccgctgtttaaagacaagatctttagagacgtttgctgccagcgggaaatcatggctctg
aaggtttactgtcgcagtgaagccaatggatgtcaagaacagatgagtctgcaccagata
cctgaccacctaaatgtgtgtccattctttgaggttccctgtccattgggtaaatgcaaa
gagcgaatgatgaggaaagagattcccgaccacctgagctggaaatgtaaacacagagag
accacctgcgacttctgcaccaccaagatgcctctgactgacctgcagaaacacaaagag
acggtgtgtccagtgttcccagtgtcctgtccaaaccactgctcctcctcctccctgccc
cggagtgagctgtccagtcaccaacatgactgtcctaaagctcaagtgatttgccagttc
caccgttatggctgcaccttcaagggtctgaaccaggaaatgaggcaacatgagtcgacc
tgtgcagctgagcacctgaggatgatggccaataggagctcctcattagagaacaaggtg
gaggaggtcaaaggtgagctgttggagcgatataaagttcttcctgctctcagcagtcgt
ctgtcagacctggagaaccagaacgacgagctgagggacaagaaccgacaaatggagcag
aaattctccaccatgcagaaactcatgagttctcactcagagaagctgctagaggtggag
ctggagcttcgttctctgcgtctcctcagagaggaggtggagaacctgagaggaacattg
gagagtgttcgggtgaggctgactgctctggaacaaggacgcagtggaaccggaccctct
acgcacactctggcacccctggagactcagcttaatcgacacgacgacatgctaagtgtc
cacgagatccgattggctgacatggacctgcgtttccaggtgttggagacggcgagctac
aacgggactctgatctggaagattcgcgactacaagagacggaaacaggaagctgtggca
gcaaagacactgtcgctgtattcacagccgttttatacaggatactttggatataagatg
tgtgcccgagtctacctgaatggagacggcatgggcaaagggacacacctgtcgctgttc
tttgtggtaatgaggggcgagtacgatgccctgctgccctggcccttcaaacagaaagtg
actctgatgctgatggaccagggtccatccaggaaacacctgggcgacgccttcaaaccg
gatccaaacagcagcagcttccgacgccctgctgcagagatgaacatcgcctccgggtgt
cctctgtttgtgtctcagagtgtcctggagacaggcagctacattaaagacgataccatc
ttcatcaaggttaccgtggatacgtctgacctacctgacccttga
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