Paralichthys olivaceus (Japanese flounder): 109642615
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Entry
109642615 CDS
T06037
Symbol
lsm3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109642615 (lsm3)
09123 Folding, sorting and degradation
03018 RNA degradation
109642615 (lsm3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109642615 (lsm3)
03041 Spliceosome [BR:
pov03041
]
109642615 (lsm3)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109642615 (lsm3)
mRNA degradation factors
5'-3' decay
Lsm complex
109642615 (lsm3)
Spliceosome [BR:
pov03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109642615 (lsm3)
Complex C
U2 snRNP components
109642615 (lsm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
109642615
NCBI-ProteinID:
XP_019963024
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADEVEQQPTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTVEIDEETYEELYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggtggagcagcaaccgacgaccaacacggtggaggagccgctggatctg
atcagactcagtctcgatgagcgaatctacgtcaagatgaggaacgacagggagctccgc
ggccgactgcatgcctacgatcagcatctgaacatgatcctgggtgatgtggaggagacg
gtgacgacggtggagattgacgaggagacatacgaagaactttacaagtcgaccaagagg
aacatccccatgctgtttgtcagaggagacggcgtggtgctcgtagctccgcccctcagg
gtgggctaa
DBGET
integrated database retrieval system
