KEGG   Paralichthys olivaceus (Japanese flounder): 109643626
Entry
109643626         CDS       T06037                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03420  Nucleotide excision repair
pov04110  Cell cycle
pov04114  Oocyte meiosis
pov04120  Ubiquitin mediated proteolysis
pov04141  Protein processing in endoplasmic reticulum
pov04310  Wnt signaling pathway
pov04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109643626 (rbx1)
   04120 Ubiquitin mediated proteolysis
    109643626 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109643626 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109643626 (rbx1)
   04350 TGF-beta signaling pathway
    109643626 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    109643626 (rbx1)
   04114 Oocyte meiosis
    109643626 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pov04121]
    109643626 (rbx1)
   03400 DNA repair and recombination proteins [BR:pov03400]
    109643626 (rbx1)
Enzymes [BR:pov01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109643626 (rbx1)
Ubiquitin system [BR:pov04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109643626 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     109643626 (rbx1)
   Cul2 complex
     109643626 (rbx1)
   Cul3 complex
     109643626 (rbx1)
   Cul4 complex
     109643626 (rbx1)
   Cul7 complex
     109643626 (rbx1)
   Cul8 complex
     109643626 (rbx1)
   Cul9 complex
     109643626 (rbx1)
DNA repair and recombination proteins [BR:pov03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109643626 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109643626 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 109643626
NCBI-ProteinID: XP_019964351
LinkDB
Position
Unknown
AA seq 109 aa
MMAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQAN
QASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 330 nt   +upstreamnt  +downstreamnt
atgatggcggcagctatggatgtagacacaccgagcggcaccaacagcggagccagcaag
aagcggttcgaagtgaagaagtggaatgctgtggcgctgtgggcttgggacattgtggtg
gataactgcgctatctgtcgaaaccacatcatggatctctgtattgagtgccaggccaac
caggcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaatcacgccttc
catttccactgtatttctcgctggctgaaaaccagacaggtgtgccctctagacaacagg
gagtgggagtttcagaaatatggacactag

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