Paralichthys olivaceus (Japanese flounder): 109645966
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Entry
109645966 CDS
T06037
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03272
Virion - Hepatitis viruses
pov04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109645966
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109645966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109645966
Membrane trafficking [BR:
pov04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109645966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Psg1
EGF
hEGF
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
109645966
NCBI-ProteinID:
XP_019967211
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
VCRYVSVTDALTTCGTNQFQCGNGKCITVRWVCDAADDCGDGTDELPATCLAKTCRPTEF
SCQDRLNQCIPSTWRCDGKADCENGADEESCAPKRCTNTEFRCRSGQCVSSSFVCDDEAD
CDDGSDEASCPPTTCSATAFQCNNSICLPRLWACDGDVDCPDGSDEWPQNCGTNRPASPG
AHQCTSLEFHCGSGECIHGSWKCDGGADCLDRSDEANCDRPTCRPDEFECGDGTCIHGSR
QCNHQYDCRDRSDETGCVNATQCDGPTRFKCRSGECILVSKVCDKNRDCRDWSDEPLREC
GFNECLFNNGGCSHICKDLKIGYECRCPAGFSLVDQKRCEDIDECANPDTCSQICINQIG
SYKCDCEEGYQVDPATKACKAIGTIAYLFFTNRHEVRKMTLDKSEYARVIPRLKNVVALD
MNIATKEIYWSDISQKKIYRAQMDVAEDSTRHSTVIGSGIDAPEGIAFDWIHGNLYWTDS
IRSTVSVVTADGSRRKTLFSRGLSKPRAIVVDPHSNFVYWTDWGTPAKIEKGGLNGGDRT
ALVTDNIEWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRHTLIIDEHKLAHPLGLTV
FEERVFWTDVSNNAILSANRLTGEDIAPVAEHLSSPEDIILYHNLKQPAGRNWCQVSNGG
CEFMCLAAPQVGRHPPKYTCVCPDNMMLARDMRTCVPAVPTSAAPAQPQIPPTVPARLPP
APPRTTPRTTPRTTPRATPKPQVHTTTAVPVVITSSAAKPAPSTTKPLVRTTTPQPRTTT
PQPVKPKILQTTTEAPATSPDVRPVFATAVPKTASPTPIALYIVLPLAIVCLVAVGGVLL
WRNYRLKNTNTIHFDNPVYQKTTEDQVHIWRSNSPDGYSYPKRQVVSLDEEADNPAFTEN
NT seq
2705 nt
NT seq
+upstream
nt +downstream
nt
ccgtgtgtcgatatgtttctgtcacagatgcactgacaacgtgtggaaccaaccagttcc
agtgtgggaatgggaaatgcatcacggtcagatgggtgtgcgacgccgccgacgactgcg
gtgacggcacagatgaacttcctgccacctgtttggctaaaacatgccggccgaccgaat
tcagctgccaggaccgtctgaaccagtgtatacccagcacctggcgctgcgatggaaaag
ctgactgtgagaatggagccgatgaggagagctgtgccccaaagcggtgcacaaacaccg
agttccggtgcaggagcggccagtgtgtgtcttcctccttcgtgtgtgacgacgaggcgg
actgcgacgacggcagcgacgaggcctcctgtccacccaccacctgcagcgccacggcct
tccagtgcaacaacagcatttgcttgccacgcctttgggcctgcgacggcgacgtcgact
gccccgacggctcagacgagtggccgcagaactgcggcacgaatcgtcccgcctcccctg
gcgctcatcagtgcacctccctggagttccactgcggcagtggcgagtgcatccacggca
gctggaagtgtgacggaggggccgactgcctcgatcgatcggatgaagccaactgtgatc
gtccgacctgtcgtcctgatgagttcgaatgcggtgatggaacttgcatccatgggagcc
gtcagtgcaaccatcaatacgactgccgggaccggagcgatgaaaccggctgtgtcaatg
cgacccagtgtgacggcccaaccaggttcaagtgccgcagcggggagtgtatcctcgtat
cgaaggtgtgcgacaagaaccgtgattgcagggattggtcagatgagcctctgagggaat
gtggctttaacgagtgcctgttcaacaacggcggctgctctcatatctgcaaagacctga
aaattggctacgagtgccggtgtcctgctggattcagcctggtggaccaaaaacgctgcg
aagatattgatgagtgtgccaacccggacacctgcagccagatctgcatcaaccagatcg
gcagttacaaatgcgactgcgaggagggttaccaagtcgacccagcgaccaaagcctgca
aggccatcggaacgatagcctaccttttctttaccaaccgccatgaggtcaggaagatga
ccctggacaaaagtgagtacgccagagtgatcccccgtctcaagaatgtcgtcgctctgg
acatgaacatcgccaccaaagagatctactggtcggacatctcccagaagaaaatctacc
gagcccagatggacgtggccgaagactccactcgtcacagcacggtcatcggcagcggca
tcgatgctcctgaaggcatcgcctttgactggatccatggtaacctgtactggactgaca
gcatccgcagcaccgtctccgtggtgaccgcggacggcagccgtcgcaaaactctgttca
gtcgaggcttgtcgaagccccgggctatagtggttgacccccacagcaacttcgtctact
ggacggactggggaactccggctaagattgaaaaggggggtctcaatggaggagaccgca
ccgctctggtcactgacaacatcgagtggcccaacggcatcacactggacctgttgaacc
agcggctctactgggtggactccaagctgcacacgctctccagtatcgacgtgcagggcg
gcggcagacacaccctcatcattgacgaacacaagctggctcacccactgggactcactg
tgtttgaggagagagttttctggacggacgtcagtaacaatgccatcctcagtgcaaaca
gactgacgggcgaggacatcgcaccagtggcggagcacctatcatccccggaagacatta
ttctttaccacaacctcaaacaacctgctgggaggaactggtgccaggtttccaacggcg
gctgtgagttcatgtgcttggccgctcctcaagtgggacgacatccgcccaaatatacct
gcgtctgtccggacaacatgatgctcgccagagatatgaggacgtgtgtgcctgctgttc
ctacatctgcagctcctgcgcagcctcagattccacctaccgttcctgcgcgtctgccgc
cagcgccacctcggaccacgcccaggaccacgcccagaaccacacccagagccacgccca
aaccccaggtccacaccaccaccgcggtgcctgtcgtaatcaccagctctgcagccaagc
cagcaccgagcaccaccaagcctttggtcaggaccaccacaccccagccgaggaccacca
caccccagccagtgaagcctaagatcctgcagaccaccacagaggctccggccacctctc
cagacgtgcgacctgtttttgctacagccgtacccaagacggcctcccccactccgatag
ctctgtacattgtcctccctctggcgatcgtctgtctcgtggcggttggcggcgtgctgc
tgtggaggaactacaggctgaagaacaccaacacgattcactttgacaaccccgtctacc
agaaaaccaccgaggaccaggtgcacatttggaggagcaacagccccgatggttactcct
acccgaagagacaagttgtgagtttggacgaagaggcagacaatccagccttcacggaaa
actga
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