Komagataella phaffii: PAS_chr1-4_0154
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Entry
PAS_chr1-4_0154 CDS
T01092
Name
(RefSeq) Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p)
KO
K15083
DNA repair protein RAD16
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr1-4_0154
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PAS_chr1-4_0154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
Nairovirus_NSm
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
8197138
NCBI-ProteinID:
XP_002490265
UniProt:
C4QXL1
LinkDB
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Position
1:complement(1691500..1693950)
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AA seq
816 aa
AA seq
DB search
MTKASEAGGFIVDDPDYKKPARRRRAAKKAVSYVETDDELPPNGTSSSKSSRKRKVKDES
EDEEYQESLGTDKVDDIKPEDDEEEDAIVIRGTSTGRNRPNGASIVNAISLSDLSDLSDL
EQNIDIPEELEELDLEVVEEAEAPRPKKKRKTPAKPKKPRVPYFTRVTEKLYNIHPSLKD
VFPNLDQHEQIEVKKATQPEGMTCTLLPFQLEGLNWLVKQEESEFGGGVLADEMGMGKTI
QTIALFMHDRTKSPNLVIAPTVALMQWKSEIELHTNGILKVGVFHGQNRGKSAEELKEYD
VILTTYSVLESVYRKQNYGFKRKRGLVKEPSPLHNTHFYRVILDEAHNIKDRQSGTAKAA
NSLDTEKRWCLSGTPLQNRIGEMYSLIRFMKLYPFCEYFCTKCDCRSTEWKFTNWKCCDT
CGHTPMLHTNFFNHFMLKNIQKYGVEGLGLESFKNIRLLLKNIMLRRTKVQRADDLGLPP
RIVEIRRDRFNEEEKDLYASLYSDSKRKFNDYVAEGVVLNNYANIFTLITRMRQLADHPD
LVLRRVGTNSIDSSGMPEGVIVCQLCDDEAEEPIESKCHHKFCRLCVSEYVEGFNGDPNK
LECPVCHLALSIDLEGPAIEVDLELIKKGSIVNRIRMGGEWRSSTKIEALVEELFHLRSD
RVTIKSIVFSQFTSMLDLVEWRLKRAGFETVKLQGSMSPLQRESTIKHFMETPSVEVFLV
SLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQHRPVKITRFCIEDSIESRI
IELQDKKANMIHATINQDDAAISRLTPSDLQFLFMN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcaagcgaagcaggcggattcatagtggacgacccagactacaagaaaccc
gccaggagaagaagagctgcgaagaaagctgtctcctacgttgagacggacgatgagctt
cctccaaacggtacctcatcctctaaatcttctaggaagaggaaggtaaaggacgaatct
gaagatgaggagtaccaggagtcgcttggaacagacaaggttgacgatattaaacccgaa
gacgatgaagaagaagatgctattgttattagagggactagcaccggcagaaacagacct
aatggtgccagtattgttaacgcaattagtctttcagatctcagtgatctgagcgatttg
gaacagaatattgatataccagaggaattagaggaactcgacctggaagtagttgaggag
gctgaggctcctagacccaaaaagaaacggaagacaccagcaaaaccgaagaaaccaaga
gtaccttatttcactagagtaactgaaaaactctacaacattcatccttctttgaaagat
gtctttccgaatttagaccagcacgaacaaatcgaagtgaaaaaagccactcagcccgaa
ggaatgacttgtactctcttgccgtttcaacttgaaggtcttaactggctcgtcaagcag
gaggagagcgagtttggtgggggtgtactggcagatgagatgggaatggggaagaccatc
cagactattgcgttgtttatgcatgacagaactaagtcccccaatctggttattgcaccc
acggtggcactaatgcagtggaaaagtgagatagaacttcataccaatgggatactgaag
gtcggggtctttcatggtcaaaatagaggaaagagtgccgaagagttaaaggaatatgat
gtgatactgacaacttattcggttcttgaatcggtttataggaagcaaaactatggattc
aaacgaaaacgtggactggtgaaagaacccagtcctttgcacaatacgcatttttatagg
gtcattttagacgaagcccacaatattaaggacagacaaagcgggacagccaaagctgca
aattctctagacacagagaagagatggtgcttgtcaggtactccgctacagaatagaatt
ggagaaatgtattctctaattcgttttatgaaactgtacccattctgtgagtatttctgc
actaagtgtgattgccgatccacggagtggaaattcactaattggaaatgttgtgacaca
tgtggacatactcccatgttacacaccaattttttcaaccatttcatgttgaaaaatatt
cagaagtacggggtagaaggcctcgggttggagagcttcaagaatatcagattattattg
aaaaatataatgctgagaagaaccaaagttcagcgggctgacgacttgggtcttcctccc
agaattgtcgagatccgccgtgatagattcaatgaggaggaaaaggacttgtatgcaagc
ttgtattccgacagtaagagaaagttcaatgactatgttgcggagggggttgttctgaac
aactatgccaacatctttacactgattactcggatgcgtcaacttgcagaccatcctgat
ctggtactcagaagagttggtaccaacagcatcgatagttctggtatgccagaaggagtc
attgtatgccaattgtgtgatgatgaggctgaagagcctattgaaagtaaatgtcaccac
aaattctgtcgcttgtgtgtttccgaatatgtggaaggtttcaacggagacccaaacaaa
ctggagtgcccagtatgtcacttggcattaagcatagacttagaaggtccagcaatagaa
gtggacctcgaacttattaaaaagggaagcattgtgaatcgtattagaatgggaggtgaa
tggaggtcttcaaccaagattgaagccttggtggaggagttgtttcatcttagaagtgac
cgtgtcactatcaaatcgattgttttctctcaatttaccagtatgttggacctggtagaa
tggcgtttgaaaagagcagggtttgaaactgttaaattgcaaggttcaatgtctcctctc
caaagagaaagtactatcaagcactttatggaaactccgtccgtagaggtgtttttggtg
tctttgaaagctggaggtgtggcacttaacttatgtgaagcttcacaagtattcattctt
gacccttggtggaatccttcggttgaatggcaatctggtgaccgtgttcatcgaattggc
caacataggcctgtgaagattaccagattttgtatagaagatagcattgagtccagaatc
atcgagttgcaagataaaaaggcaaatatgattcatgcgaccattaaccaagatgatgct
gctatcagcagattgacaccttcagacctacaatttttgtttatgaactga
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