Komagataella phaffii: PAS_chr2-1_0123
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Entry
PAS_chr2-1_0123 CDS
T01092
Name
(RefSeq) Mitochondrial isoleucyl-tRNA synthetase, null mutant is deficient in respiratory growth
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAS_chr2-1_0123
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppa01007
]
PAS_chr2-1_0123
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr2-1_0123
Enzymes [BR:
ppa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
PAS_chr2-1_0123
Amino acid related enzymes [BR:
ppa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PAS_chr2-1_0123
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PAS_chr2-1_0123
Prokaryotic type
Other AARSs
PAS_chr2-1_0123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
8198519
NCBI-ProteinID:
XP_002491007
UniProt:
C4QZQ3
LinkDB
All DBs
Position
2:complement(222543..225605)
Genome browser
AA seq
1020 aa
AA seq
DB search
MLRRRALFTVEGRRYFSSCLSRCYSVSSDSGSDVSHKYSSTLRLPKTSFPNRSSSELISS
KLLPQCTDDVYYGNLNNTDRELFILHDGPPYANGELHIGHALNKVLKDIINRFNLIDGKR
VFYKPGWDCHGLPIELKALEALRKEQNTRVKILKSQLKKTTNEEERDNIEHEIKQVKRSK
LTPSDIRTLARSFALATSEAQSKSFQELGVMGDFKNPYKTLDPSYVINQLYIFKQMMDNG
LIRRQEKPVYWSCENATALAEGELEYNDSHNSTAIYLKFPVDTTDLKELSSLGNKVNLLI
WTTTPWTIVANKAVSVNSKLDYTILKHQSEYLIVALDLASQVMSSKEGIEDTKIHLSGAQ
LLKTTYINSLTGGVKQPILDGDHVTNVAGTGLVHTAPGHGNDDYWVCLKNDIAPYSPVDS
FGRYTPDVPESCKDLIGLHVLKEGAPKVVEKLTNLGAIFSIQKNYIHSYPYDWRSKKPII
IRSTPQWFINIDQIKERTLKTLQDVKFYPDKGFKRLETFIQRRQEWCISRQRSWGVPIPV
IYEKDTGKEILNDEVIGAITKYIEGAGVDSWFDKNCDMSNFLPESMKADSEKYVRGNDTM
DVWFDSGTSWHLIEDFLKHNGQDINSRNYLADVYLEGSDQHRGWFQSSLLTKMAICKDKE
KTISPYRKIITHGFTLDEKGNKMSKSLGNTLKPQDVINGVKSKNIPALGVDGIRLWVAQS
DYFTDVAIGPTILKHVAENLKKIRFTIKFILGNLEGFSMDKSVPYQDLQLLDQYALSKLY
SLQQICKESYSEFNFSKVVRNLNHHMNVELSSVYFDLVKDRVYADAPDSASRRSVQTVLV
AILQSYISILSPITPIIAQEAWNHAPRYVTNDTKSPFSKGWHELPQSYRRADLELEFSQL
FELNSTIKLLMDQGSRVDKSIRNTLETAVYLNCEEGTPVWDLLQKHQSYLSDYFLTSQVF
INQELPDFSVSYHYEDKIRLDCGTIDVHVVQSSLHKCPRCWKYEVRPDHELCHRCDKVVN
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttaagacgaagagcgctcttcactgttgaaggaagaagatattttagtagctgccta
tccagatgctactctgtgtcatctgattccggctcagatgtttcccacaaatattcctct
actctacggctgccaaaaacttctttccctaacagatcgtcatcggagttaatatcatca
aagttactcccacaatgtactgatgacgtgtattatggcaacttaaacaacactgatcgg
gaactgtttattctgcatgatggacctccatatgccaacggcgagttacatataggccat
gcattgaataaagttctgaaggatattatcaatagatttaacctcatcgatggtaagagg
gtcttctataaacctggatgggattgtcatggactgcccattgaacttaaagcgttagaa
gctttgagaaaagaacaaaataccagagttaagatactgaaatcgcaattgaagaaaaca
accaatgaggaggagagagacaatattgaacatgaaattaaacaagtcaaacggtctaaa
ttaacaccatcagatatacgcacgttggcacgaagctttgctctagccacgtctgaggct
caatcgaaaagttttcaagaactaggtgtaatgggagatttcaaaaacccttacaagact
ctggacccatcgtatgtcatcaatcaattgtacattttcaaacaaatgatggacaatgga
ctaattagacgacaggaaaaaccagtgtattggagttgtgagaatgctacagcattggca
gaaggtgaattggagtataacgacagtcataacagtactgctatctacttgaagtttcct
gtcgacactacagatttgaaggagctgtcaagtttgggtaataaagtcaatctattaatc
tggacaactacaccttggacaattgtcgccaacaaagccgtctccgtcaattccaagctg
gattacactatattaaaacatcaatctgagtacctcattgtcgccctagatttagcttcc
caagtaatgagttcgaaggaaggtattgaggacactaaaatacatttatctggcgcccaa
ttactaaaaacaacctatatcaattcgttaaccgggggcgtaaagcagccgattttggat
ggagaccatgttactaacgttgccggaacaggtttagtccatacagcacctggacatgga
aatgatgattattgggtatgtttgaagaacgatattgcaccctattctcctgttgactct
tttggaagatatactccagatgtaccagaaagttgtaaggatttgatcgggcttcatgtc
ctcaaggaaggagccccaaaagtggttgaaaaactgactaatcttggtgcgatcttttcc
atccaaaagaattacatccattcgtatccatatgattggaggtcaaagaaaccgataatt
attagatctactccccaatggttcatcaacattgatcaaatcaaggagaggaccctcaaa
acattgcaagatgttaaattctatccagacaaaggatttaagagactagagacttttatt
caaagaagacaggaatggtgtatctcaagacaaagaagctggggagttcctattcctgtt
atttatgagaaggatacgggaaaggaaatattgaatgatgaagtgattggtgctataact
aagtatattgagggagcaggcgtcgactcttggtttgacaaaaactgtgacatgagtaat
ttcttaccagaatctatgaaggcagattcagaaaagtatgttagaggaaatgatactatg
gatgtttggtttgatagtggaactagttggcatttgatagaggattttttgaagcacaat
gggcaggatatcaattccagaaactaccttgcagacgtctacttagaaggatctgatcaa
catagagggtggtttcaaagttctctgttgaccaaaatggctatttgcaaagacaaggaa
aagaccatcagtccgtacaggaaaattattactcacggattcacacttgatgagaaagga
aacaaaatgtccaaatctttaggcaatacactgaaacctcaagatgtaatcaacggcgtc
aaaagcaagaatatacccgctctgggtgttgatgggatacgattgtgggttgctcaatct
gattatttcacagatgtagctattggaccaacaattttgaaacatgttgcagaaaacctg
aagaagattagatttactataaagtttattctaggtaatttggagggcttctctatggac
aaatctgttccctaccaagatctacaattgctggatcagtatgcattgagcaaactttac
agcttacagcaaatctgtaaggagagttactctgagttcaacttttccaaagtcgtgagg
aaccttaatcatcatatgaatgtggaactgtcatctgtttattttgaccttgtcaaggat
agggtttatgcagatgccccggattccgcatctcgaaggtcagttcaaactgttttggtt
gcaatcttacaatcttacatttccatcttgagtccaattactccaatcattgcccaggaa
gcatggaaccatgctccacgctatgttactaacgatacgaagtcgccattctcaaaaggc
tggcacgaactaccacaatcataccgcagagcagatttagagttggagttttctcaacta
tttgagcttaacagcacgatcaagcttttaatggaccagggatccagagttgataaatct
attaggaacactttagaaacagccgtctatttgaattgtgaagaagggacccctgtgtgg
gatcttttacaaaagcatcaaagctacctatccgattacttcttgacttcccaggttttt
atcaaccaagaacttcctgatttctctgtttcttaccattatgaagataagattcgacta
gattgtggaaccatcgatgtacatgttgttcaaagctctctgcataaatgtcccagatgt
tggaaatacgaagttaggccagatcacgaactgtgccatagatgtgacaaggtggtcaac
taa
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