Komagataella phaffii: PAS_chr4_0137
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Entry
PAS_chr4_0137 CDS
T01092
Name
(RefSeq) Putative tubulin tyrosine ligase associated with P-bodies
KO
K06047
tubulin---tyrosine ligase [EC:
6.3.2.25
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppa04812
]
PAS_chr4_0137
Enzymes [BR:
ppa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.25 tubulin---tyrosine ligase
PAS_chr4_0137
Cytoskeleton proteins [BR:
ppa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Other tubulin modification proteins
PAS_chr4_0137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
SurE
ATPgrasp_YheCD
Motif
Other DBs
NCBI-GeneID:
8201048
NCBI-ProteinID:
XP_002493542
UniProt:
C4R6Y8
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Position
4:complement(join(270109..271346,271420..272389))
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AA seq
735 aa
AA seq
DB search
MHVLLINDDGPPNLMSSPYAKFLVDAIRNHTDWELSIVVPSQQRSWIGKAHFAGKELTAQ
YLYSALNCPMDDSSHGPFASPVSRYREDKNLQEWVLIDGTPASCTDIGVHHLYKDKPPVD
LVLSGPNYGRNSTALYIMASGTLGGALEGALTGKRAIGLSYSFYTRDHDAKVLKIASELS
LKLIKYLYNNWHPEAELYSINVPLKDSLGPDTKAIFAPILENRWGSVFTKVIESKKDLPE
VSDIVDETVAHKTTFKWTPDFDSVHTSVKESVGLNDGKVVEQGNIRYVTILPFFRVLSTN
NLVSLHLKQFTRVLTPLRVKLISNKSVLLVTYDKNSYIFDPLINAMERKLPKVPVVSTFP
EKYHKLVHYGDYEGLNFDKIVSEPSYKVCSYIYRKALIRKHYLANTVKVYKTKHPESILA
THVPLSYQLELDYAEFLDDALDEYLDLREELEENESSGCHKTYILKPSMSDKAQGIRIFR
TIDELQAIFDSFEDEASDAEEEAEETNDAASDNRIIISQLRHFIVQEYVDKPLLLPQYNN
RKLHIRTYIVANGDLEVYVFEKMLLLFANDPYVSPEKTEKDEDGVFILNGHLTNTCAQKT
VITDEITDANTNVVELWSSKLTENQKQKLFGQVKEIVKELFKAALSVDRINFQPLSNAFE
VFGIDFLVDENFECSLLEVNSYPDFKQTGDDLKQIIYQLFEGIVDQCISPFYFPDSKKKN
PLMHKVLDTNTGSLS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttcttctaataaacgatgatgggcctcccaatctaatgtcctctccatacgcc
aagtttttagtggatgctattaggaatcatacagactgggaactgagcattgtggtgccc
tcgcaacagagatcttggatcggtaaggctcattttgcaggcaaggagttaaccgctcag
tacttgtactctgctttgaattgtcctatggatgactcatctcatggcccatttgccagt
ccggtatctcgttatcgtgaggataagaatcttcaggaatgggtacttatagacggaaca
ccagcatcatgtaccgatattggtgttcatcatctgtacaaagataaaccccctgttgat
ttggttctcagtgggcctaattacggaaggaactcgactgctctgtatataatggcaagt
gggacattaggaggtgctctggaaggggcattgaccgggaaaagagctatcggtttaagt
tattctttttataccagagatcatgatgctaaagtgttaaaaattgcttccgaactgagt
ctcaagttgattaaatacctctataacaactggcatcctgaagctgaattgtattccatc
aatgttcccttgaaagactccttaggtcctgatacaaaggccatatttgccccaatctta
gaaaatagatggggctccgtcttcaccaaagtcattgaatcgaaaaaggacctcccagaa
gtatccgatattgttgatgaaactgttgcgcataaaaccactttcaaatggactcccgac
tttgattccgtccataccagcgtaaaggaaagtgttggtctgaatgatggtaaagtcgtt
gagcaaggtaatatcaggtatgtaactattttgcctttcttcagagtattgtctactaac
aatttagtgtcactccacttaaagcagtttacaagggtgttgactccattgagggtgaaa
ttgatttccaataaatcggtactattggtcacctatgacaaaaactcttacatcttcgac
cctttgatcaatgccatggaaagaaaacttcccaaggtgccagtagtaagtacttttcct
gagaagtaccacaaactagttcattacggcgattatgagggactgaactttgacaagata
gtgagtgagccctcatacaaggtttgttcttatatctatagaaaggcgctgattagaaag
cactatctagctaacactgttaaggtttacaaaacgaagcaccctgagtctattttggct
acccatgtacccttatcgtaccaattggaattagactatgcagagtttttggatgatgcc
ttggacgagtatttagatttgagagaggaattggaagagaatgagtcttcaggctgtcac
aaaacttatattctgaaaccaagtatgagcgataaggctcagggcattcgaattttcaga
actattgacgaattacaggcaatttttgattcattcgaagatgaagcgtctgatgccgag
gaagaggccgaagagactaacgatgctgcctcagacaatcgcataatcatctctcaattg
cgtcactttattgttcaagagtatgttgacaaacccttgcttctgccccaatataataat
aggaagctacacattagaacgtacattgttgccaatggggaccttgaggtttacgtattc
gaaaaaatgctgttgttgtttgcaaatgatccctatgtttctcccgagaagactgaaaaa
gatgaagatggagtctttattttgaatggccatttaacaaatacatgcgctcagaagaca
gtcatcaccgatgaaatcacagatgctaacaccaatgtcgttgaactgtggagctccaag
ttaactgaaaaccaaaagcaaaagttatttggtcaagttaaggagatcgtcaaagagctt
ttcaaagctgcattatctgtagacagaatcaactttcaaccattaagtaatgcatttgaa
gtttttgggattgactttttggtggatgaaaatttcgaatgttcacttctagaagtcaac
tcctaccccgatttcaagcaaacgggagacgatttgaagcagataatttaccagctcttt
gaggggattgtggatcaatgcatctccccgttttactttccagattccaagaagaaaaac
cctctcatgcacaaggtattggacactaataccggtagcttaagctga
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