Komagataella phaffii: PAS_chr4_0709
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Entry
PAS_chr4_0709 CDS
T01092
Name
(RefSeq) isoleucine-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAS_chr4_0709
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppa01007
]
PAS_chr4_0709
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr4_0709
Enzymes [BR:
ppa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
PAS_chr4_0709
Amino acid related enzymes [BR:
ppa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PAS_chr4_0709
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PAS_chr4_0709
Prokaryotic type
Other AARSs
PAS_chr4_0709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1_2
AHSP
Motif
Other DBs
NCBI-GeneID:
8200604
NCBI-ProteinID:
XP_002494149
UniProt:
C4R8P5
LinkDB
All DBs
Position
4:1357436..1360654
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AA seq
1072 aa
AA seq
DB search
MSEQDTRFSFPKEEERILSYWKEINAFEQSNKLNEGNKRFSFYDGPPFATGTPHYGHILA
STIKDIIPRYANMNGMYVERRFGWDTHGLPVEHEIDKKLGITGKEDVMAMGIAKYNEECR
SIVMRYAHAWKDTIGRLGRWIDFENDYKTLYPEFMESVWWVFKQLYEKDSVYRGLRVMPY
STGCTTPLSNFEAQQNYKDVNDPAVTVGFRLVDDENTFLVAWTTTPWTLPSNIALAVNPE
FEYVKIYDEKTKKHYILLESLLKTLYRKPKNEKYKIVEKIKGSELVGLKYQPLFNYFYDK
FKDHGFVVYGGDFVTDDSGTGIVHQAPAFGEVDFEAATAAGVIDEKRVPPNPVDDNGKFS
SQVPDWEGVYVKDADTKIIKYLTEKGNILLSSQIRHSYPFCWRSDTPLLYRTVPAWFVRV
KEIVPDMLKNVEATHWVPQTIKEKRFSNWIANARDWNVSRNRYWGTPIPLWVSDDFEEIV
CIGSIQELRDLSGNQDITDIHREKIDDITIPSRQGKGVLRRIEEVFDCWFESGSMPYAQN
HYPFEGKDEFSSKFPADFISEGLDQTRGWFYTLTVLGTHLFNTAPYKNVIVSGIVLAGDG
KKMSKRLKNYPDPGIVLDGYGADALRLYLINSPVLRAETLKFKEEGVKEVVSKVLLPWWN
SFKFLEGQVALLKKLNQIDYKYDPEVRSENVMDKWLLATIQSLIKFIHQEMAEYRLYTVV
PKLLKLIDDLTNWYIRFNRRRLKGENGVDDCIKALNTLTEALFTLVRAMAPFTPFLSENI
YQRLRPLIPDAVLSKYTKDPRSVHFLAYPVLNVSLFDEKIEIAMARMQKVIDYGRNIREK
KTISLKTPLKTLVILHSDPGYLADVESLKSYITEELNVRDVIITSDEDKYGVAYGVVADW
PVLGKKLKKDAQKVKVALPSVSSEEVKEFLKTGKITVAGIELSSEDLNAVRGLPESKSQD
GHEVRSDRDTLVILDTKVYEELKTEGTARELVNRIQKLRKKASLDATDDVIVQYAITNDT
IGLDSIMKQHADMLIKTCRRPLEPLAETSKDVIAEEECQIQDTLIKIRLLNI
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaggacactagattctccttccccaaggaagaagaacgtatcttgagctac
tggaaggaaataaatgctttcgaacaatcaaataagttaaatgagggaaacaagagattc
tcattctacgacggtccacctttcgccactggtactccccattacggccatattttggcc
tccactatcaaggatattatccccaggtatgccaacatgaacggtatgtatgtggaacgt
cgttttggctgggatactcatggcttgccagtggaacacgagatcgacaagaaacttggt
atcactggaaaggaagatgtgatggccatgggtatcgccaaatacaacgaagaatgtcgt
tccattgtcatgcgttatgctcatgcctggaaagataccattggaagactaggtcgttgg
atcgattttgagaatgattacaagactctttatcctgagttcatggagtctgtgtggtgg
gttttcaagcaattgtatgagaaggactctgtttaccgtggactgcgagtgatgccttac
tccactggctgcaccactcctttgtctaattttgaggcccagcaaaattataaggatgtt
aatgatccagctgtcactgttggttttagattggtagatgatgagaatactttcctggtt
gcatggacaactacaccatggactcttccttctaatattgctttggctgtaaacccagag
tttgaatacgttaaaatttatgacgaaaagaccaagaagcactacattttattggagtca
ttgttaaagaccttgtacagaaaacctaaaaatgaaaaatacaagatcgttgaaaagatc
aagggttccgaattggtcgggctgaaataccaacctttgttcaattatttctatgacaag
ttcaaagatcatggttttgtagtttacggcggtgacttcgtcaccgatgacagcggtact
ggtattgtccaccaggctccagcttttggtgaggttgattttgaagctgccactgccgct
ggtgttattgatgaaaagagggttcctcctaaccctgttgatgacaacggaaagttcagt
tcccaagttccagattgggagggggtatatgtcaaggacgctgacacaaagattatcaaa
tacttgactgaaaagggaaatattctattatcttcccaaatcagacatagttatccattt
tgttggagatctgatactcccttgctgtatagaacggtgccagcttggtttgtccgtgtt
aaagagatcgttcctgacatgttgaaaaacgttgaagctactcattgggtcccccaaacc
attaaggagaagagattttccaactggattgccaatgcacgggactggaatgtttctcgt
aacagatattggggaacacctattccattatgggtttctgatgattttgaagaaattgtg
tgtatcggttcaattcaagaactgagagatctatctggcaaccaagatatcactgacata
caccgtgaaaagattgacgacatcactattccttctagacaaggaaagggcgtgctaaga
agaatcgaagaagtgtttgattgttggttcgagtcaggttccatgccttacgctcaaaac
cactatcctttcgaaggaaaggacgagttcagctccaaattccctgctgatttcatatcg
gaaggtcttgatcagaccagaggttggttctacaccttgactgtgctaggtactcacctt
ttcaacactgcaccctacaagaatgtcatagtttcgggtatcgttctagctggtgacggt
aaaaagatgtccaagcgtctgaagaactatccagaccctggaatagtgttggacggttac
ggtgccgatgctttgcgtctttacttaatcaactctcctgttcttagagccgagactttg
aagttcaaagaggaaggagtcaaggaagtagtttccaaggttcttcttccttggtggaac
tccttcaagtttttagaaggtcaggtagctttgctgaagaagttgaaccaaattgactac
aagtatgatcccgaagtcaggagtgagaatgtcatggacaaatggttgttggccaccatt
caatcgcttatcaaatttattcaccaagagatggctgagtacagactgtacactgtggtc
cctaagttgctaaaattgattgatgacttgactaactggtacattcgtttcaaccgtcgt
cgtctgaagggtgagaatggtgttgatgactgtatcaaagcattgaacacattgacggaa
gcccttttcactttagtccgtgctatggcacccttcaccccattcttgtctgagaacata
taccaaagattgagacctcttatcccagatgctgtcttgtctaagtacaccaaagatcca
agatcggttcatttcttggcgtacccagtcctgaacgtatctctgtttgacgagaagatt
gagattgccatggctcgtatgcaaaaggttattgattacggacgtaacatccgtgagaag
aagaccatatctctgaagaccccactcaaaactttggttattcttcactcagatccaggt
taccttgctgatgtcgaatccctaaaatcctacattaccgaggagctgaatgtccgtgat
gtaatcatcacttcagacgaggacaaatatggagtagcatatggggttgtcgctgactgg
ccagtattgggtaagaagttgaagaaggatgcccagaaagtcaaagtagcgcttccttca
gtgagttctgaagaagtcaaggaatttttgaagactggtaagattacagttgctggaatt
gagctctcatctgaagacttgaatgcagttcgtggtctgcctgagtccaaatctcaagac
ggacatgaagtcagaagtgacagagacactctggttatcctggacactaaagtgtatgag
gagctgaagacagagggtaccgcacgtgagttggttaatcgtatccagaagctacgtaag
aaagcctccttggatgcaactgatgatgttattgtacaatatgctattacaaatgatacc
attggattggactcaataatgaaacaacacgccgatatgctaataaagacctgcagaaga
ccgttggaaccgttggccgagacttctaaggacgtaattgctgaggaggaatgtcagatc
caggacacgctcatcaagatccgtttgcttaatatctag
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