Pelagovum pacificum: I8N54_06150
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Entry
I8N54_06150 CDS
T06971
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf00300
Lysine biosynthesis
ppaf00550
Peptidoglycan biosynthesis
ppaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I8N54_06150
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I8N54_06150
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppaf01011
]
I8N54_06150
Enzymes [BR:
ppaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
I8N54_06150
Peptidoglycan biosynthesis and degradation proteins [BR:
ppaf01011
]
Precursor biosynthesis
Amino acid ligase
I8N54_06150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QQA44158
LinkDB
All DBs
Position
1221406..1222902
Genome browser
AA seq
498 aa
AA seq
DB search
MSSARPEEQTKTLSALGLTAQGGREAEITGITVDSREVMPGYLFAALPGGSVHGADFIAT
ALELQAGAILTDAEGARRAADEIAESDVALIVAEDPRQTLAQTAALWFGRHPSTVVAVTG
TNGKTSVSTFCRQIWIEMGEEAVNLGTTGVEGAWTHGLRHTTPDPITLHRVLAEAARQGI
THVAMEASSHGLDQRRLDGMILAAAGFTNFTQDHLDYHKTFDAYFDAKMGLFTRVLADDG
VAVVNLDDPKGPLVAQIAEERGQEVIGVGRHPEARLRILGQRFDATGQELRFEWQGRSKL
SRLDLIGGFQAENVLMAAALTIGAGAAPDEVFDVLRHLQTVRGRMQLAATRDNGATVFVD
YSHTPDSVGVAIRALRPHVIGRIIAVVGAGGDRDRGKRPLMGAAAAENADKVIVTDDNPR
SEDPADIRAAVLDGAPGAIEIGDRAEAILRGADMLEPGDALLICGKGHETGQIVGDAILP
FDDVEQASVAVAALDGRI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgcacggccggaagagcagacgaagacgctgtcggcccttggtctgaccgca
cagggcgggcgagaggcggagatcaccgggatcacggtggacagccgcgaggtgatgccg
ggctacctgttcgcggccctgccgggcggcagcgtccacggcgcggatttcatcgcgacg
gcgctggaacttcaggcgggcgcgatcctcaccgatgccgagggtgcgcggcgggccgcc
gacgagatcgccgagtcggacgtcgcgctgatcgttgccgaggatccccgccagacgctc
gcgcagaccgccgcgctctggttcgggcgtcatccctcgacggtcgtcgcggtgacgggg
acgaacggcaagacctcggtgtcgaccttctgccgccagatctggatcgagatgggcgag
gaggccgtgaacctcggcacgaccggggtggagggcgcctggacgcacgggctgcgccac
acgacgccggacccgatcacgctgcaccgcgttctggccgaggccgcgcgccagggcatc
acccatgtcgcgatggaagcgtcgagccacgggctcgaccagcggcggctcgacgggatg
atcctcgccgcggccgggttcaccaacttcacgcaggaccacctcgactatcacaagacg
ttcgacgcctacttcgatgcgaagatggggctgttcactcgcgtgctggccgacgacggg
gtcgccgtggtcaacctcgacgatccgaaggggccgctcgtggcccagatcgcggaggaa
cgcgggcaggaagtgatcggcgtaggccgtcaccccgaggcgcggttgcgcatcctcggg
cagcggttcgacgcgacggggcaggagctgcggttcgagtggcaggggcgcagcaagctg
agccggctcgacctgatcggcggcttccaggcggagaacgtcctgatggccgccgcgttg
acgatcggagcgggcgcggcgcccgacgaggtgttcgacgtgcttcggcatctgcagaca
gtgcgggggcggatgcagctcgcagcgacgcgcgacaacggcgcgacggtgttcgtcgac
tacagccacacgcccgactcggtcggggtggcgatccgcgcgctgcggccgcacgtcatc
gggcggatcatcgctgtcgtcggtgccggcggcgaccgggacaggggcaagcggccgctg
atgggcgccgccgcggcggagaacgccgacaaggtcatcgtgaccgacgacaacccgcgt
tcggaggatcctgccgacatccgcgccgctgtactggacggcgcgccgggcgcgatcgag
atcggcgaccgggccgaggcgatcctgcgcggtgccgacatgctggagccgggcgacgcg
ctgctgatctgcggcaagggccacgagacgggccagatcgtcggcgacgcgatcctgccg
ttcgacgatgtcgagcaggcgagcgttgcggtcgccgcgctcgacgggcggatctga
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